| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6012 |
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| Symbol | |
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| ID | 4314916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 563714 |
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| End bp | 565213 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638153856 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_777890 |
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| Protein GI | 115360753 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGGC ACGGCCTGCG CCTCGCGGCG GCACTCGCGC CGCTCGCGCT CGCACTCGGC
GCGTGCAAGT CCGTCGGCCC CGATTACACG CTGCCGCAGC AGGCGTACGT GAATGCGCCG
CTCGCGAACC ATGCGCTCGA CGACGCGAAC GGCGCGCTCG TCTCGCGCAA CGCCGTGCCC
GGCAACTGGT GGCAGCTGTA CGACGATCCC GTGCTCGACG CGCTCGTGCG CAGCGCGCTG
AAATCGAACA CCGATCTGCG CGTCGCCGCG GCCAACCTCG CGCGTTCGCG TGCAGCGCTG
GAAGTCGCGA ACGAACAGGG CGGCTTCTCC GGCAGCGCGG AAGCAGCCGT GCAGCGCGCG
CAGGAATCGG CCGAGCAGTA TTTGCTTGAA AACAAGCTGC CGGTCGTCAA CGAAGGCACG
GTCGGCATCA ACGTGTCGTA TGAACTCGAT CTGTTCGGCA AGTTGCGGCG CGGCGTCGAG
GCCGCGCGCG CGGACAGCGA AGCCGTGCAG GCGGCCGCCG ACCTCGCGCG CATCACGGTC
GTCGCGGACG TCGTGCGTGC GTACGTCGAA TCGTGCTCCG CCGGCGACGA ACTCGCGATC
GCGAAGCAGT CGCTCGCGCT GCAGCAGCAG CGCGTGAAGC TGTCGCAGCG GCTGCGCGAT
GCGGGGCGCG GCAACCAGAC CGACGTGACG CGTGGCGTCA CGCAGGTGCG CACGCTGTCC
GCCGACATCC CGCGTTTCGA AGGTCGCCGC AAGATCGCGC AATACCAGCT CGCCGCGCTG
CTCGCGCGCT CGCCGGCCGA CCTGCCGAAG GCGGTCGCCG AATGCGAGCG CCTGCCGAAG
CTGCGCCAGC CGATTCCGAT CGGCGACGGC GCCGCGCTGC TTCGCCGCCG CCCCGACGTT
CGCGAAGCCG AGCGCCAGCT CGCCGCCGCA ACCGCACGGA TCGGCGTCGC GACCGCCGCG
CTGTATCCGT CGATCAGCAT CGGCGCGTCG GCCGGCTCGG TCGGCGTCGC CGCCGACCTG
TTCTCGCCCA CCACGAATCG CTGGTCGTTC GGACCACTGA TCAGCTGGTC GTTCCCGGTC
AACGGCCAGC GCGCGCGCGT GCGCGAAGCC GAAGCCGCGA CCGGCGGCGC ACTCGCGCAC
TTCGACGGCG TCGTGCTGAA CGCGCTGCGC GAAACGCAGT CGAGTCTCGC GACCTACGCG
GCCGACGTGC AGCGCACCGA TGCGCTGCGC ACGGCGTACG AATCGGCGCG CAACTCCGCT
GACGAAACGC ACCGGCTCTT TGTGGCCGGC CGCGAATCGT TCATCTCCGA TCTCGACGCG
ACGCGGACGT TGACGAGCGT GCGCGCGCAG GTCGCCGCGG CCGAAGGGCA AGTCGCCGCC
GACCAGGTGA AGCTGTTCCT CGCGCTCGGC GGCGGATGGG AAGGCGACGC GGCGCCCGCT
GTGTCGCAGC AGACGTCGGC GGCCAGTGCG CCGGCTGCTG CGTCGGCCCC GGCCAGGTAA
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| Protein sequence | MKRHGLRLAA ALAPLALALG ACKSVGPDYT LPQQAYVNAP LANHALDDAN GALVSRNAVP
GNWWQLYDDP VLDALVRSAL KSNTDLRVAA ANLARSRAAL EVANEQGGFS GSAEAAVQRA
QESAEQYLLE NKLPVVNEGT VGINVSYELD LFGKLRRGVE AARADSEAVQ AAADLARITV
VADVVRAYVE SCSAGDELAI AKQSLALQQQ RVKLSQRLRD AGRGNQTDVT RGVTQVRTLS
ADIPRFEGRR KIAQYQLAAL LARSPADLPK AVAECERLPK LRQPIPIGDG AALLRRRPDV
REAERQLAAA TARIGVATAA LYPSISIGAS AGSVGVAADL FSPTTNRWSF GPLISWSFPV
NGQRARVREA EAATGGALAH FDGVVLNALR ETQSSLATYA ADVQRTDALR TAYESARNSA
DETHRLFVAG RESFISDLDA TRTLTSVRAQ VAAAEGQVAA DQVKLFLALG GGWEGDAAPA
VSQQTSAASA PAAASAPAR
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