Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6005 |
Symbol | |
ID | 4314909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 557056 |
End bp | 557682 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638153849 |
Product | TetR family transcriptional regulator |
Protein accession | YP_777883 |
Protein GI | 115360746 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.695496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC GAAAGCGCGC GGCAATTCTC GCTGCGGCGA TCGAGGAATT TCGCGCGGCG GGCTACGACG CGACCAGCAT GGATCGCATC GCCGCGCGCG CGGACGTGTC GAAGCGCACC GTCTACAACC ACTTCCCCGG CAAGGAAGCA TTGTTCGCAG CGATCCTGCA CCAGCTGTGG GACGCGACGC TGACCGCCGG CGCGCCGACC TATTGCGCCG ACGTGCCGCT GCGTGATCAA TTGCTCGCAC TGCTGGAGCG CAAATTGCGG TTATTGAACG ACGAAGCGTT TCTCGCGCTC GCTCGCGTCG CGATCGGCGC GGCCATCCAC TCGCCGGAAC GCGCGCGCGA CATGGTCGAA CGCATGGGCG AGCGCGAAGA GGACGTGACG GTATGGATTC GTGCGGCCGC GGCGGCTGGC CGGCTGGCGG CGACCGATCC CGTATTCGCC GCACATCAGC TGCACGGGAT CGTGAAAGCG TTCGCATTCT GGCCGCAGGT GACGATGGGC CAGCCGCCGC TGGGCGCGCA GGAACAGCAG AAGGTCGCGG AAATGGCCGC CGACATGTTT CTTGCGTACT ACGCGTGTCC GGATCACGGC GGGGAGTCAG GTGCAGGGCA GGGCTGA
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Protein sequence | MTDRKRAAIL AAAIEEFRAA GYDATSMDRI AARADVSKRT VYNHFPGKEA LFAAILHQLW DATLTAGAPT YCADVPLRDQ LLALLERKLR LLNDEAFLAL ARVAIGAAIH SPERARDMVE RMGEREEDVT VWIRAAAAAG RLAATDPVFA AHQLHGIVKA FAFWPQVTMG QPPLGAQEQQ KVAEMAADMF LAYYACPDHG GESGAGQG
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