Gene Bamb_6005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6005 
Symbol 
ID4314909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp557056 
End bp557682 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID638153849 
ProductTetR family transcriptional regulator 
Protein accessionYP_777883 
Protein GI115360746 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.695496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC GAAAGCGCGC GGCAATTCTC GCTGCGGCGA TCGAGGAATT TCGCGCGGCG 
GGCTACGACG CGACCAGCAT GGATCGCATC GCCGCGCGCG CGGACGTGTC GAAGCGCACC
GTCTACAACC ACTTCCCCGG CAAGGAAGCA TTGTTCGCAG CGATCCTGCA CCAGCTGTGG
GACGCGACGC TGACCGCCGG CGCGCCGACC TATTGCGCCG ACGTGCCGCT GCGTGATCAA
TTGCTCGCAC TGCTGGAGCG CAAATTGCGG TTATTGAACG ACGAAGCGTT TCTCGCGCTC
GCTCGCGTCG CGATCGGCGC GGCCATCCAC TCGCCGGAAC GCGCGCGCGA CATGGTCGAA
CGCATGGGCG AGCGCGAAGA GGACGTGACG GTATGGATTC GTGCGGCCGC GGCGGCTGGC
CGGCTGGCGG CGACCGATCC CGTATTCGCC GCACATCAGC TGCACGGGAT CGTGAAAGCG
TTCGCATTCT GGCCGCAGGT GACGATGGGC CAGCCGCCGC TGGGCGCGCA GGAACAGCAG
AAGGTCGCGG AAATGGCCGC CGACATGTTT CTTGCGTACT ACGCGTGTCC GGATCACGGC
GGGGAGTCAG GTGCAGGGCA GGGCTGA
 
Protein sequence
MTDRKRAAIL AAAIEEFRAA GYDATSMDRI AARADVSKRT VYNHFPGKEA LFAAILHQLW 
DATLTAGAPT YCADVPLRDQ LLALLERKLR LLNDEAFLAL ARVAIGAAIH SPERARDMVE
RMGEREEDVT VWIRAAAAAG RLAATDPVFA AHQLHGIVKA FAFWPQVTMG QPPLGAQEQQ
KVAEMAADMF LAYYACPDHG GESGAGQG