Gene Bamb_6001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6001 
Symbol 
ID4314905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp552206 
End bp553237 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content64% 
IMG OID638153845 
ProductparB-like partition proteins 
Protein accessionYP_777879 
Protein GI115360742 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.931169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.508963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGG AAACATCGAA GGACAAGAAG CCGACCGGCA ACCTGCATCT CGCTGCCGGC 
CTGCTGCGCG GGCTCGCGCA GGAAAACGCG GCGCTGGAAA CGCGCCTGCC TGAGCCGCCG
CCGGCATCGA ACCCCACCGC CGAAGCCGCA ACCCCCGCGG CCCCGACTGC CGCCACGCCC
GCGGACGCGC ACGATCTCGG CGCGCCGCAG AGAGTCGCAG TCAAGGACTG CATCCCGAAC
CCGTTCAACC CGCGTGTGTT TTATTCGGAG TCGAGCCTGC ACGAGCTCGC GCTGACGCTG
AAGCGGGAAG GGCAGATCGA ACCGATCAAG GTCACGCGGC TTCCGGAATT TCCCGGCAAG
CTCGTCGTGA TCGACGGGCA ACGCCGTTTG CGTGCGACGA GCATCAACGG CGACGAGACG
ATCAACGCGA CGTTCCGTAC GGACCATACG CCCGAGCAGC TCTATACGAT CGCGTATCGC
GCCAACCACG ACCACGAACG CCAGACGATC TTCGACGACG CGGTCGCGTG GAAGCGGCTT
CTCGACGAAA AGGTCTTCCC CGACCAGAAC ACGCTCGCGG AGAAGATCGG CAAGGACAAG
GCATCGATCA GCAAGACGCT GTCGCTGAAC GCGCTACCGA ACACGCTGCT CGAACGGATG
GCCAGCGCGA ACGACGTGGT CGGCCTGCAG GCGGCGTACT TCCTCAAGCT GATCTTCGAG
CGCCTGGGCG AACCGGCTGC CGACCGTCTG CTCACGGCGG TGATCGACCG GAAAAAGTCG
GTACGCGACC TCGAGAATTT CCTGCGCGCG CAGAGCGACG GCAACAAGAA GACGGGGCGC
ACGCGCTACA GCGTTCGCCA CGATTTCGCG CTCGAATCGC GCGCGATCGG TCAACTGAAG
ACCTATCCGG ACGGACGCCT GGATCTGCAA CTGAAGGGCG TCGATGCGTC CCACCAGGAA
TCGCTCGCCG ACCGGCTCAA GACCGTGATC GACGCATATG TCGCCGAACT GGCTGTAGCG
GCGCAAAAGT AA
 
Protein sequence
MAKETSKDKK PTGNLHLAAG LLRGLAQENA ALETRLPEPP PASNPTAEAA TPAAPTAATP 
ADAHDLGAPQ RVAVKDCIPN PFNPRVFYSE SSLHELALTL KREGQIEPIK VTRLPEFPGK
LVVIDGQRRL RATSINGDET INATFRTDHT PEQLYTIAYR ANHDHERQTI FDDAVAWKRL
LDEKVFPDQN TLAEKIGKDK ASISKTLSLN ALPNTLLERM ASANDVVGLQ AAYFLKLIFE
RLGEPAADRL LTAVIDRKKS VRDLENFLRA QSDGNKKTGR TRYSVRHDFA LESRAIGQLK
TYPDGRLDLQ LKGVDASHQE SLADRLKTVI DAYVAELAVA AQK