| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6000 |
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| Symbol | |
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| ID | 4314904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 550797 |
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| End bp | 552113 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638153844 |
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| Product | hypothetical protein |
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| Protein accession | YP_777878 |
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| Protein GI | 115360741 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5527] Protein involved in initiation of plasmid replication |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.588479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.85496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGTA AGCCCGCAAT CAAAGGCTCC GACAAGCAGG TTTCGCTATT TCAGACGCCC
GAGCCTCCCG ATCTGCTGCG CAAGGCGGTC CAGGCCATTC ATATCGCTCC GAAGTCCGGA
AAGATCGGTC TCCAGCAGCG CAAGATGTTC AGCTCGCTGA TCAAGAACGC CCTTCGTCAG
GAAGCGTTCG AGCCCGGCCG GACGAGCTTC TCGATCTCGA TCGCGGCGCT CTCGCACGAG
AGCGGGTTGA ACAGCAACAA CACGAAGTAC GTGAAGGACA CGGTCAACTC GCTGATCAGT
ACCGTCGTCA ACTGGGACTA CCTTGCCGCG GACCGCTCGA CGGTGTGGAA GGCGTCGGGC
CTGCTCGCCG GCGCCGAGCT CGAGCAATCG GTGCTGAAGT ACAGCTTCTC CGACCAGATT
CGCAGCGAGT TGCTCAATCC GGAGATCTAC GCGCTCATCG ATATGCGGAT CGCGCGCGAG
TTTCGGCGCT CGCACTCGCT CGCGCTGTGG GAGAACACGG TGCGCTACGA AGGGATCGGC
ATCACGGCGA AGATTCCGCT GCCGAAATTC CGCGATCTCA TTCTCGGTCA GGACAAGGCA
TCGCAGTCCT ACAAGGAGTA CAAGCTCTTC AAGAGCAAGG TCCTGGTGCC GTGCATTCAG
GAGGTGAACG AAGTTTCCGA CCATACGCTC GAGCTGATCG AACACAAGTC AGGTCGCAGC
GTGGAGGCCG TGCAGTTCAA GGTGACGCGC AAGCAGAGCG CGGATACGGT CGAGGAAGGC
GACGTCAAGA ACGAAGCGCT CGTCGACGAA GTCGCCAAGT TCGGCATCCC GCGTTCGGAA
GCGCGCCGGT TGATCACGCA GTACGGCGTG CAGCGCATCA AGGCGGCGAT CGCCTATACG
CTCAATCGGA CTACGAAGAA GAACGCGGCG CCCATCGACA ACGTGGCCGC GTATTTCCGC
AAGGCGCTGA CGCACGGCTA TACGCTGGCT GACGGGCAGG GGACCGAAAC GGCCGCCCCG
GCGAAGGAAT CCGCGCAGAG CAAGCAGGAA CAGATTCGCG ACAAATACCT GGCCGCGAAG
GTCGACGAAG CCGGTGCGTA TTTCCGCGAG CTGGAGATCG ACGACCAGAC CAAGCTGATC
GAGCGCTACA ACGAGACGGT GGCCGGTTCG AAGGATCTCA CGCTATCGCC GAAGAAGAAG
GCGAGCAAGC TGGCGCAAAC CAGTTTCTTC CGGTGGCTGG CGCTCGATAC CTGGGGCGAA
CCGACCTCGG ACGACTTGCT CGAATTCCTG CTGAAAAGCA GCCTCGCGAC CAACTGA
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| Protein sequence | MPRKPAIKGS DKQVSLFQTP EPPDLLRKAV QAIHIAPKSG KIGLQQRKMF SSLIKNALRQ
EAFEPGRTSF SISIAALSHE SGLNSNNTKY VKDTVNSLIS TVVNWDYLAA DRSTVWKASG
LLAGAELEQS VLKYSFSDQI RSELLNPEIY ALIDMRIARE FRRSHSLALW ENTVRYEGIG
ITAKIPLPKF RDLILGQDKA SQSYKEYKLF KSKVLVPCIQ EVNEVSDHTL ELIEHKSGRS
VEAVQFKVTR KQSADTVEEG DVKNEALVDE VAKFGIPRSE ARRLITQYGV QRIKAAIAYT
LNRTTKKNAA PIDNVAAYFR KALTHGYTLA DGQGTETAAP AKESAQSKQE QIRDKYLAAK
VDEAGAYFRE LEIDDQTKLI ERYNETVAGS KDLTLSPKKK ASKLAQTSFF RWLALDTWGE
PTSDDLLEFL LKSSLATN
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