Gene Bamb_5989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5989 
Symbol 
ID4314893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp538060 
End bp538539 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content65% 
IMG OID638153833 
Producthypothetical protein 
Protein accessionYP_777867 
Protein GI115360730 
COG category[S] Function unknown 
COG ID[COG5654] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.614311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGACGC TGTGGCGGAT CAGCAATTAC GTCGATCTGA AAGGCATCGG CGGTTTGCGG 
GCCGGCGGGC GCTGGCATTT TGCCGGGCAG CCCGTCGTCT ATCTCGCCGA GCATCCGGCG
CTCGCGCTGC TCGAGACGCT CGTCCACTTC GAAATGGCCA CCGTTGCGCA ATTGCCGAGC
GGATACCAGT TGCTGCGCGT CGAGGTGTCT GAATCGGTGG ACATTGCGGA GATCGCGGAA
GGCGATGCGC CGGCCGACTG GCGGGAGAAC GTCGACTGGA CCCGTAGCGC CGGCACCGAG
TGGCTGCACA CGCAGCCGAG CGCACTGCTG CGCGTACCGA GCGTCGTCGT GCCGCACGCG
CACAACTTCC TGTTGAATCC GCTGCACCCG GCCGCATCCG ACGTCCGCAT CGCGGAAGTC
ATGCAGTCGC CGTACGACAG CCGGATTCTG CGGCTGGTCC AGTCGAACAA GAGCGAATAG
 
Protein sequence
MTTLWRISNY VDLKGIGGLR AGGRWHFAGQ PVVYLAEHPA LALLETLVHF EMATVAQLPS 
GYQLLRVEVS ESVDIAEIAE GDAPADWREN VDWTRSAGTE WLHTQPSALL RVPSVVVPHA
HNFLLNPLHP AASDVRIAEV MQSPYDSRIL RLVQSNKSE