Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5987 |
Symbol | |
ID | 4314891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 535559 |
End bp | 537040 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638153831 |
Product | heavy metal sensor signal transduction histidine kinase |
Protein accession | YP_777865 |
Protein GI | 115360728 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCG GTCGATCGCT TGGCGCGACG CTCGCGCTCG CGTTCGGGGC GACGATGCTC GCGGTCTTCG CGCTCGTCGG CACGTACGTG TATACCGGCC TCGAGCGGCA GGTGAGGACG CAGGACGATC TGGACATCGT GCTTGCCGCA CGACACACGC GCCGGCTCGC GGGCGAACTC GATTCGCTCG ACGCCGTGCG CGCGCACGCG GACCGGCTGA CGAGCCAGGT GCTCGGCAAC ACGGCATTGT CGATGGCCGT GGTCGACGAG CGGGGCAACG TGCTCGCGCG GCACAACGTC AAGCGGAACG AACGCGAGGA TCTGCCGCCG GCTGCGTCTG GCACGGCGTC GCCCGCACCG CCTGCGCTGC CCGATGCCGA GCTGTTTCCG CCCCACGCGA CGCCGGTGCC GGCGGCCGAA CGGATCACGG TCGACCGGAT CGCGACATGG CGCGCCGACG GCGGCACGTC CGTGCGCGGT GTCGTGGCCG GCGCGATGCT GCGCGACGGT ACGCAGATCC GCATCGCGAT CGCGCGCGAC ATGAGCGATC GCGCCGAACT GCTCGACGGC TATCGCGACA AGCTGAAGCT CGCCGGCGGG CTCGGCGCCC TGTGCGCGAT GCTGCTCAGC TACTGGCTGA TCCGCACGGC GCTCGCACCG CTGCGCGAGA TCGTCGCGAA CACCGGCCGG ATCACCGTCG ACAAGCTCGA CGCGCGGCTC GACGCCGCGC GCGCGCCGCG CGAACTGCGC GCGCTCGTCG ATGCGCAGAA CGCGATGCTC GGCCGGCTGC AGCAAGCGTT CGGACATCTG TCGCAATTCA GCGCCGATCT CGCGCACGAC CTGCGCACGC CGCTGAACAA CATGCGCGGC GCGACCGAGG TGGCGCTTGC GCGGCCGCGT TCGCCCGGCG AATATCAGGC GCTGCTCGAA TCGAATCTCG AGGAATACGA CCGTCTCGCG CGAATGATCG AGAACGTGCT GTTTCTCGCG CGCGCCGAAC ACCCGACCTT CGTGACACGG CAGCGCGCGT TTGACGTGCA TGACGAGCTG ACGCGCATCG CCGAATACTT CGAAGGGCTC GCCGATGAAG CGGGTTCGAC GCTGCGTGTG GAAGGGCACG GCCAGCTGAC TGCCGATGTC GAACTGTTTC GCCGCGCGGT CGGCAACCTG CTCGCGAATG CGCTTCGCTA CACGCCTGCG GGCGGTGTCA TCGCGCTGAG CGTCGACGAA ACGGCGGACG CGGTACGCGT CGTCGTCGAG AATCCGGGCG AGCCGATCGA TCCCGCGCTG CTGCCGCGCA TCTTCGACCG GTTCGTGCGC GGCGACCCCG CGCGCAGCGG CGGCGTGCCG GGCGGCACGG CCGGGCTCGG GCTTGCGATC GTGCGTTCGG TGATGGAGCT GCACGGCGGC ACCGCGCGCG TCGAAAGCGA CGCGGCGGGC ACGCGGTTCA TCCTCATCTT CGTCAGGAAC GCTGCGTCTT GA
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Protein sequence | MTLGRSLGAT LALAFGATML AVFALVGTYV YTGLERQVRT QDDLDIVLAA RHTRRLAGEL DSLDAVRAHA DRLTSQVLGN TALSMAVVDE RGNVLARHNV KRNEREDLPP AASGTASPAP PALPDAELFP PHATPVPAAE RITVDRIATW RADGGTSVRG VVAGAMLRDG TQIRIAIARD MSDRAELLDG YRDKLKLAGG LGALCAMLLS YWLIRTALAP LREIVANTGR ITVDKLDARL DAARAPRELR ALVDAQNAML GRLQQAFGHL SQFSADLAHD LRTPLNNMRG ATEVALARPR SPGEYQALLE SNLEEYDRLA RMIENVLFLA RAEHPTFVTR QRAFDVHDEL TRIAEYFEGL ADEAGSTLRV EGHGQLTADV ELFRRAVGNL LANALRYTPA GGVIALSVDE TADAVRVVVE NPGEPIDPAL LPRIFDRFVR GDPARSGGVP GGTAGLGLAI VRSVMELHGG TARVESDAAG TRFILIFVRN AAS
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