| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5986 |
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| Symbol | |
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| ID | 4314890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 534085 |
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| End bp | 535578 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638153830 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_777864 |
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| Protein GI | 115360727 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTTC CTCACCCGCT CCCGTTCGCC CGCCGCGTCG TCGCGCTCGG CGTTGTCACC
GCGTTGGCCG CTTGCTCGAC GCTGCCGCCC TATTCGCCGC CGACCGTCGC GGTGCCCACG
CACTATGCGG GCGCACCGGC CGCGCAACCG GGCTGGCAAG TCGCGGCGCC GGCCGATGCC
GCGTCGCGCG GCGCGTGGTG GACCGTGTTC AACGATGCGG ATCTGAACGC GCTCGAAGCG
CGCGTCGACG TGTCGAACCA GACCGTGAAG AAAGCCGTTG CCGACCTCGA GCAAGCGCGC
GCGACGGTCG ACTACCAGCA TGCGGGCTTT CTGCCGACCG TGACGGCGGG CGTGGCGCAA
AGCCGTTCAC GCATATCGCA GAACAAGCTG GGTTCGTCAC TCGCCGGCAA GACGACACCC
GACCATCAGC TCGGCGTCGC GGCAAGCTGG GAACCCGACG TGTTCGGCCG CGTGCGCGAT
GCAGTCGCAG GTGCGCAGGC GAACGCGGAC GCGAGCGCGG CCGATCTGCA AGCCGTCAAG
CTGTCGGTCA CGGCGGAACT CGCGACCGAC TATTTCGCGC TGCGCTCGCT CGACACGCAA
AAGCAGCTGC TCGACGACAC GGTGCGGGCC TATGCGGATG CGCTGAAGCT GTTGCAACAG
CAGCTCGCGG CCGGCGCGAT CGATGCGTCC GCCGTCGCAC AAGCCGAAAC TCAACTGGAA
GCGACGCGCA CGCAGGACAC CGACATCGAC GCGTCGCGGG CACAGCTCCA GCATGCGATC
GCGACGCTCG TCGGCGAGAA CGCGTCGACG TTCGCGTTGC CGCCGCGCGT TCAAGCGTTC
GACGTGCCGG CCATTCCGGC CGGCGTGCCG TCGCAACTGC TCGAACGACG GCCTGACATC
GCCGCTGCCG AGCGTCGCGT CGCGGCCGCG AACGCACAGA TCGGCGAAGC GCGCGCCGCG
TTCTTCCCCG ACCTCGTGCT GTCGGCGAGC GCGGGGCTCG AAAGCGGGTT CTTCATGCCG
TGGCTGACAG CGCCAAGCCT GTTCTGGTCG CTCGGCCCGC AACTCGTCGG CACGCTGTTC
GACGGCGGCC GACGCAGCGC GACGTTGCGC GGCGCGCACG CGCAGTACGA TGGCGAGGTC
GCCGACTATC GGCAGACCGT GCTGGGCGCA TTCCAGCAGG TGGAGGATCA ACTGTCCGCG
CTCGATGCGC TCGCGTCCGA AGCCGCCAGT CAACAGCGTG CGACCGACGC GGCCGACCTG
TCGCTGCGGC TGACGACGAA TCGCTTCAAC GCTGGCGCCG TCAGCTATCT GGACGTGGTG
ACCGCGCAAA CGATCGCGCT GACCAATCGG CGCCTGGCCG ACCAGATCGC CGCGCGCCGG
ATGGAAGCTG CGGTCGGATT GCTGAAGGCG CTGGGCGGCG GCTGGCACGC GGGCGCGGAT
CTCGCCGCTT CCACCGCCGG ATCGGGCACG GCGATCAAGA CGCAGCGTTC CTGA
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| Protein sequence | MRLPHPLPFA RRVVALGVVT ALAACSTLPP YSPPTVAVPT HYAGAPAAQP GWQVAAPADA
ASRGAWWTVF NDADLNALEA RVDVSNQTVK KAVADLEQAR ATVDYQHAGF LPTVTAGVAQ
SRSRISQNKL GSSLAGKTTP DHQLGVAASW EPDVFGRVRD AVAGAQANAD ASAADLQAVK
LSVTAELATD YFALRSLDTQ KQLLDDTVRA YADALKLLQQ QLAAGAIDAS AVAQAETQLE
ATRTQDTDID ASRAQLQHAI ATLVGENAST FALPPRVQAF DVPAIPAGVP SQLLERRPDI
AAAERRVAAA NAQIGEARAA FFPDLVLSAS AGLESGFFMP WLTAPSLFWS LGPQLVGTLF
DGGRRSATLR GAHAQYDGEV ADYRQTVLGA FQQVEDQLSA LDALASEAAS QQRATDAADL
SLRLTTNRFN AGAVSYLDVV TAQTIALTNR RLADQIAARR MEAAVGLLKA LGGGWHAGAD
LAASTAGSGT AIKTQRS
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