| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5972 |
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| Symbol | |
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| ID | 4314876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 509727 |
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| End bp | 510731 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153811 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_777850 |
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| Protein GI | 115360713 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0382965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCCGC AGATGATCTC GCCCGATTTC GTCGAAGATG CGCTCGAGAG CCTGCGCCGG
CAACGGATTC CGGCCGGGCC GGTACTGCAC GCGGCCGGCC TGCCGGCCGC CGTGCGCGGG
CCGGTTACGC CGCAGCAGTA TGGCCGGCTG TGGCTGGCAA TCGCCAGCGC GATCGACGAC
GAATTTTTCG GGCTCGCGGC CCGGCCGATG CGGCGGGGCA GCTTCATGCT GCTGTGCCAT
GCCGTGCTGG ATGCGGGCAC GCTCGAGAAC GCGCTGCGGC GTGCGCTGCA GTTCTTGCGC
GTGGTGCTGG ACGAGCCGCA CGGCGAGCTC GTGGTCGCCG ACGGACAGGC GCAGATCGTG
CTCAAGCAGG CCGGCGCGCC CTATTCCGCG TTCGCTTACC GGACGTTCTG GCTGATCCTG
CTCGGGGTCG CCTGCTGGCT GACCGGCCGG CGCATTCCAC TGCAGCGCAT CGATTTCGCG
TGCCCGTGCC CCGATCACCG CAGCGATTAT CACCAGTTCT TCGGGGTACC GGTCCATTTC
GACCGGCCCG ACAGCCGGCT CGCCTTCAAC GCCGCGTATC TCGGGCTGCC GACGATCCGC
TCCGCACAAG CATTGAAGAC CTTCCTGCGC GGCGCGCCCG GCAATCTGCT GGTCCGCTAC
CGGCACGACA CCGGCTGGGT GGCAAAAACG CGCGCGCACC TGAAGGCACT GCCGGCCGCC
GAGTGGCCGG ACTTCGACAC GCTGGCCGTG CGCCTCGGCA CGACGCCCGC GACGCTGCGG
CGACGCCTGC GCAGCGAGGG ACAGAGCTTC GCGTCGATCA AGGACGAGCT GCGCGGGGCA
CTGGCGCAGT CGCTGCTGCG CGCGCACAGG CTCAGCGTCG CGGAAATCGC GGCCGAACTC
GGCTTCACCG AACCCAGCGC GTTTCATCGC GCGTTCCGGA AATGGACGGG CACGAGCCCG
GGCGCGTTTC GGCGGGACGT CAATGTGGGG CAATCGGAGC ATTGA
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| Protein sequence | MGPQMISPDF VEDALESLRR QRIPAGPVLH AAGLPAAVRG PVTPQQYGRL WLAIASAIDD
EFFGLAARPM RRGSFMLLCH AVLDAGTLEN ALRRALQFLR VVLDEPHGEL VVADGQAQIV
LKQAGAPYSA FAYRTFWLIL LGVACWLTGR RIPLQRIDFA CPCPDHRSDY HQFFGVPVHF
DRPDSRLAFN AAYLGLPTIR SAQALKTFLR GAPGNLLVRY RHDTGWVAKT RAHLKALPAA
EWPDFDTLAV RLGTTPATLR RRLRSEGQSF ASIKDELRGA LAQSLLRAHR LSVAEIAAEL
GFTEPSAFHR AFRKWTGTSP GAFRRDVNVG QSEH
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