| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5970 |
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| Symbol | |
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| ID | 4314874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 507128 |
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| End bp | 507895 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153809 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_777848 |
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| Protein GI | 115360711 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.944237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCG AGGATCGCGT TTTTCTGATT ACGGGCGCCG GTTCGGGCCT CGGCGCCGCG
GTGGCGCGCA TGGTGGTGGC CGCAGGCAGC AAGGCGGTTT TGCTGGACGT CAATGAGGAT
GCCGGCACGA GCCTCGCGCA CGAACTCGGT GCGGCCGCAT GCTTCGTGAA GACCGACGTG
ACGAGCGAAG CCGACGGGCA AGCTGCCGTC GCCGCCGCGC GCGACGCGTT CGGCCGCATC
GATGTGCTCG TGAACTGCGC GGGCGTCGCG CCGGGTGAGA AAGTCGTCGG GCGCGACGGT
CCGCATTCGC TCGAGCGCTT CGCGCGCGCG GTGTCGATCA ACCTGGTCGG CACGTTCAAC
ATGATCCGCC TGGCGGCCGA AGTAATGTCG AAGCAGGACG CCGACGCGCA AGGCGAGCGC
GGCGTGATCG TCAACACCGC GTCGGTCGCG GCGTTCGACG GACAGATCGG GCAGGCCGCG
TATGCGGCAT CGAAGAGCGG CGTGGTAGGC ATGACGCTGC CGATCGCGCG CGAACTCGCG
CGGTTCGGCA TTCGCGTGGT GACGATCGCA CCGGGCATCT TCGCGACGCC GATGATGGCC
GGCATGCCGC AGGACGTGCA GGACGCGCTC GGCAAGAGCG TGCCGTTCCC GCCGCGGCTC
GGCCGCCCCG ACGAATTCGC GGCGCTGGTG CGCCACATCG CCGAGAACAC GATGCTGAAC
GGCGAAGTCA TCCGTCTCGA TGGCGCGTTG CGCATGGCGC CGCGCTGA
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| Protein sequence | MNIEDRVFLI TGAGSGLGAA VARMVVAAGS KAVLLDVNED AGTSLAHELG AAACFVKTDV
TSEADGQAAV AAARDAFGRI DVLVNCAGVA PGEKVVGRDG PHSLERFARA VSINLVGTFN
MIRLAAEVMS KQDADAQGER GVIVNTASVA AFDGQIGQAA YAASKSGVVG MTLPIARELA
RFGIRVVTIA PGIFATPMMA GMPQDVQDAL GKSVPFPPRL GRPDEFAALV RHIAENTMLN
GEVIRLDGAL RMAPR
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