| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5965 |
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| Symbol | |
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| ID | 4314869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 500602 |
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| End bp | 501909 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153804 |
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| Product | dihydropyrimidine dehydrogenase |
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| Protein accession | YP_777843 |
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| Protein GI | 115360706 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.663226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.568701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACC TTCGCTGCAC CATCGCAGGC ATCACTTCGC CGAATCCCTT CTGGCTCGCG
TCCGCGCCGC CGACCGACAA GGCCTACAAC GTCAACCGCG CGTTCGAGGC TGGCTGGGGC
GGCGTCGTCT GGAAGACGCT CGGGCTCGAT CCGCACGTCG TCAACGTCAG CTCGCGCTAC
GGCGCGGTGC AGTGGAACGG CCAGCGGATC GCCGGGCTGA ACAACATCGA GCTGATCACC
GACCGCCCGC TCGACGTGAA CCTCAGAGAG ATCGCGCAGG TGAAGCGCGA CTGGCCCGAC
CGCGCGCTGA TCGTGTCGCT GATGGTGCCG TGCAACGAGC GCGACTGGAA ATGGATCCTG
CCGCTCGTCG AGGACACGGG CGCCGACGCG GTCGAACTGA ACTTCGGCTG CCCGCACGGG
ATGAGCGAGC GCGGAATGGG CGCGGCCGTC GGACAGGTGC CGGAATACGT CGAGATGGTC
ACGCGCTGGG TCAAGGAAGG CACGAAGCTG CCGTGCCTCG TGAAGCTCAC GCCGAACATC
AGCGACATCC GGATGGGCTC GCGCGCCGCC TACAAGGGCG GCGCGGACGG CGTGTCGCTG
ATCAACACGA TCAACTCGAT CGTCGCGGTG GACCTCGACC AGATGGCGCC GATGCCGACC
GTCGACGGCA AGGGCACGCA CGGCGGCTAT TGCGGACCCG CGGTCAAGCC GATCGCGCTG
AACATGGTCG CGGAGATCGC GCGCGACCCG GAAACGCCGA ACCTGCCGAT TTCCGGCATC
GGCGGGATTT CGTCGTGGCG CGACGCGGCC GAATTCATGG TGCTCGGCGC CGGCAGCGTG
CAGGTGTGCA CCGCCGCGAT GCACTACGGC TTCCGGATCG TGACGGATCT CGCCGACGGG
CTGTCGAACT GGATGGACGA GAAGGGCTAC GCGACGCTCG ACGACATCCG CGGCCGCGCG
GTGCCGAACG TCACCGACTG GAAATACCTG AACCTGAAAT ACGACATCAA GGCGCGCATC
GACCAGGACC GCTGCATCCA GTGCGGGCTG TGCCATATCG CGTGCGAGGA CACGTCGCAC
CAGGCGATCA CCGCCGAGAA GGACGGCGTG CGGCATTTCG AAGTGGTGGA CGCGGAGTGC
GTCGGGTGCA ATCTTTGCAT GCATGTGTGT CCGGTCGAGC AATGCATCAC GATGGAGCGG
GTCGACGCGG GCGACTATGC GAACTGGACC ACGCATCCGA ACAATCCGGC GCGGGCCGAC
GCGGGTGCCG GCCCGGCGGA ACCCGCGAAG CACGCGAAGG CGGCCTGA
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| Protein sequence | MADLRCTIAG ITSPNPFWLA SAPPTDKAYN VNRAFEAGWG GVVWKTLGLD PHVVNVSSRY
GAVQWNGQRI AGLNNIELIT DRPLDVNLRE IAQVKRDWPD RALIVSLMVP CNERDWKWIL
PLVEDTGADA VELNFGCPHG MSERGMGAAV GQVPEYVEMV TRWVKEGTKL PCLVKLTPNI
SDIRMGSRAA YKGGADGVSL INTINSIVAV DLDQMAPMPT VDGKGTHGGY CGPAVKPIAL
NMVAEIARDP ETPNLPISGI GGISSWRDAA EFMVLGAGSV QVCTAAMHYG FRIVTDLADG
LSNWMDEKGY ATLDDIRGRA VPNVTDWKYL NLKYDIKARI DQDRCIQCGL CHIACEDTSH
QAITAEKDGV RHFEVVDAEC VGCNLCMHVC PVEQCITMER VDAGDYANWT THPNNPARAD
AGAGPAEPAK HAKAA
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