Gene Bamb_5963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5963 
Symbol 
ID4314867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp497490 
End bp498947 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content69% 
IMG OID638153802 
Productphenylhydantoinase 
Protein accessionYP_777841 
Protein GI115360704 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR02033] D-hydantoinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.417247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.398194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCC TGATTCGCGG CGGCACCGTG GTCGATGCGG ACCGCACCTA TCGCGCGGAC 
GTACTGTGTG CCGACCCGCA GGACGGCGGC ACGATCCTGC AGATCGCCGA GACGATCGAC
GCGCCGGCCG GCGCGACGGT GGTCGACGCG CACGACCAGT ACGTGATGCC GGGCGGCATC
GATCCGCATA CGCACATGGA ACTGCCGTTC ATGGGCACGA CGGCGAGCGA CGATTTCTAT
TCGGGGACGG CCGCCGGGCT GTCGGGCGGC ACGACGAGCA TCATCGACTT CGTGATCCCG
AGCCCGAAGC AGCCGCTGAT GGACGCGTTC CGCGAATGGC GCGGCTGGGC CGAGAAGGCG
GCGGCCGACT ACGGTTTTCA CGTGGCCGTC ACATGGTGGG ACGAATCGGT GCACCGCGAC
ATGGGCACGC TCGTGCGCGA GCACGGCGTG TCGAGCTTCA AGCACTTCAT GGCGTACAAG
AACGCGATCA TGGCGGACGA CGAAGTGCTC GTGAACAGCT TCTCGCGTTC GCTCGAACTC
GGCGCGCTGC CGACCGTGCA CGCGGAGAAC GGCGAACTCG TGTTCCGGCT GCAGCAGGCG
CTGCTCGCGC GTGGAATGAC CGGGCCGGAG GCGCATCCGC TGTCGCGTCC GCCCGAGGTC
GAGGGCGAGG CCGCGAACCG CGCGATCCGC ATCGCGCAGG TGCTCGGCGT GCCCGTGTAT
ATCGTGCACG TGTCGTCGAA GGACGCGGTC GATGCGATCA CGCGCGCGCG CAGCGAAGGG
CTGCGCGTGT TCGGTGAAGT GCTGCCGGGC CACCTGGTGA TCGACGAGGC CGTTTATCGC
GACCCGGACT GGACGCGTGC GGCCGCGCAC GTGATGAGCC CGCCGTTTCG CTCGGCCGAG
CATCGCGAGG CGCTGTGGCG CGGGCTGCAG GCCGGCCAAC TGCATACGAC GGCGACCGAC
CACTGCGTGT TCTGCGCGTC GCAGAAGGCG ATGGGCCGCG AGGACTTCAC GAAGATTCCG
AACGGTTGCG GCGGCGTCGA GGACCGCATG TCGGTGCTGT GGCATCACGG CGTGAATCAC
GGCCGCATCA CGCCGAACGA GTTCGTGCGG ATCACGTCGA CGAACGCCGC GCAGATCTTC
AACCTGTATC CGCGCAAGGG GGCCGTGCAG GTTGGCGCCG ATGCCGACCT CGTCGTGTGG
GATCCGGCCG CGACGAAGAC GATCTCGGTG AAGACCCATC ACCAGCAGGT CGACTTCAAC
GTGTTCGAAG GGATGACCGT GCAGGGCGTC GCGACGCACA CGCTCACGCG CGGCGCGCTC
GCGTGGGCCG ACGGCGAGCT GCGCGCGGTG CGCGGCGCGG GCCGCTACCT GGAGCGGCCG
CCGGCCGCCG GCTACTACGA AGCCGCCCGC ATCGCGAACC GGCTGCGCGA GCCGCATCCG
GTCGAGCGCG CGGGCTGA
 
Protein sequence
MAILIRGGTV VDADRTYRAD VLCADPQDGG TILQIAETID APAGATVVDA HDQYVMPGGI 
DPHTHMELPF MGTTASDDFY SGTAAGLSGG TTSIIDFVIP SPKQPLMDAF REWRGWAEKA
AADYGFHVAV TWWDESVHRD MGTLVREHGV SSFKHFMAYK NAIMADDEVL VNSFSRSLEL
GALPTVHAEN GELVFRLQQA LLARGMTGPE AHPLSRPPEV EGEAANRAIR IAQVLGVPVY
IVHVSSKDAV DAITRARSEG LRVFGEVLPG HLVIDEAVYR DPDWTRAAAH VMSPPFRSAE
HREALWRGLQ AGQLHTTATD HCVFCASQKA MGREDFTKIP NGCGGVEDRM SVLWHHGVNH
GRITPNEFVR ITSTNAAQIF NLYPRKGAVQ VGADADLVVW DPAATKTISV KTHHQQVDFN
VFEGMTVQGV ATHTLTRGAL AWADGELRAV RGAGRYLERP PAAGYYEAAR IANRLREPHP
VERAG