Gene Bamb_5959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5959 
Symbol 
ID4314863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp492867 
End bp493382 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content73% 
IMG OID638153798 
Productmethionine-R-sulfoxide reductase 
Protein accessionYP_777837 
Protein GI115360700 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.109162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.856375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACCC GCAGACATCT GCTGTTCGCC GGCGTCACCG GCCTCGCCAC GCTCGCGGCA 
CTGTCGTCGG CTGGCCGCCG TGCGCTCGTC GGCCGCGCGT TCGCCGCGCC GCCCGCCGCC
CCGTTCGAAA TCACCCGCAG CGACGCCGAA TGGCGCCGCC GCCTCACGCC CGCCCAATAC
ACGGTGCTGC GCAATGCCGG CACCGAGCCG CCGTACAGCA GCCCGCTGAA CGCCGAGCAC
CGCCGCGGCA CGTTCGCGTG CGCCGGCTGC GACCTCGCGC TGTTCTCGTC CGACACCAAA
TTCGACAGCC ACACCGGCTG GCCGAGCTTC TGGAAGCCGC TCGACCACGC GGTCGCGACC
GAGACGGATC CGTCATACGG GATGGCGCGC ACCGAAGTGC ACTGCCGCCG CTGCGGCGGC
CACCTCGGCC ACGTGTTCGA CGACGGCCCG CCGCCCACCG GCCTGCGCTA CTGCATGAAC
GGGCTCGCGC TCGCCTTCCA CCCGGCCGCC GCCTGA
 
Protein sequence
MPTRRHLLFA GVTGLATLAA LSSAGRRALV GRAFAAPPAA PFEITRSDAE WRRRLTPAQY 
TVLRNAGTEP PYSSPLNAEH RRGTFACAGC DLALFSSDTK FDSHTGWPSF WKPLDHAVAT
ETDPSYGMAR TEVHCRRCGG HLGHVFDDGP PPTGLRYCMN GLALAFHPAA A