| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5956 |
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| Symbol | |
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| ID | 4314861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 488460 |
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| End bp | 489026 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638153796 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_777835 |
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| Protein GI | 115360698 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.341434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.49488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACGA AATCGACCGT CCGCGAACAG ATTCTCGACC ACGCGATCAC GCTGATGATG
CTGCGCGGCT ACAACGGCTT CAGCTATCGA GACCTGTCCG ATCTGGTAGG CGTGAAGACG
TCGAGCATCC ACTACTACTT CCCGTCGAAA GACGATCTCG TGCTGGAAGC GGTGGCGGCG
TATAGCGACG AAGTGCTTGC AGCGATGCGC GCGATCGATT CGGCGTTGCC GGCCGACGTC
AAGCTCAGCC TCTACACGAA GCTGTTCGGC AGAACGCTCG GCGATGGCAA CCAGATCTGT
CTGTGCGGCA TGCTCGCGGC GGACATCGAA TCGTTGCCGG AAAGCGTGCG GCAGGCGGTT
CAGGCCTTCT TCAAGGCCAA CGAGAAGTGG CTCGCCGAGT TGCTGGCGCA GGGCGCGAAG
GAACGCACGC TGCAGTTCAG CGGCAAGCCG GAAACGGCGG CACGCACGTT GTATGCGGCG
TTTCAGGGGA GCGTGCTGGC CAGCCGGCTG TTTCATACGC GGGCGCGTCT CGAGGATGTC
GAGGGCGTCT GGAAAGCCCG GTCGTGA
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| Protein sequence | METKSTVREQ ILDHAITLMM LRGYNGFSYR DLSDLVGVKT SSIHYYFPSK DDLVLEAVAA
YSDEVLAAMR AIDSALPADV KLSLYTKLFG RTLGDGNQIC LCGMLAADIE SLPESVRQAV
QAFFKANEKW LAELLAQGAK ERTLQFSGKP ETAARTLYAA FQGSVLASRL FHTRARLEDV
EGVWKARS
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