Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5949 |
Symbol | |
ID | 4314854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 482745 |
End bp | 483632 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638153789 |
Product | DNA-binding transcriptional regulator CynR |
Protein accession | YP_777828 |
Protein GI | 115360691 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.233312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.638196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCTAC GTCATATCCG TTACTTCCTT GCAGTAGCAG AACAGAAGAA CTTCACGCGC GCTGCCGAGG CGCTTCATGT ATCGCAGCCC ACCTTGTCGC AGCAGATCCG GCAGCTCGAG GACACCCTGG GAACACTGCT GTTCGACCGT TCCGGCAGAA CCGTTCACCT GACCGACGCG GGCGAAGCGT GGATGCGTTA TGCCAAGCTC GCGCTACAGG ACCTTGACGC AGGGGTGAGG GCGATACACG ACGTGGCGGA ATTGAGTCGG GGCAGCCTGC GTTTCGCAGT AACGCCGACC TTTACGGCTT CCTTGGTCGG GCCGGTCGTC GATGGCTTCC ACCAACTGCA TCCTGGCATC AGGATCGATA TCCGCGAACT CACACAGGAT CAGATGGAGG CGCAGCTTGC AGACGACAGG CTTGATATCG GTGTCGCATT CCATCCGGCC TTTTCAGTCG ACATCGAAAG CCAACCCCTC TTCGCGGAAA CGCTGAGCCT GGTGGTAGGC CGCAACCACC CGCGTGCCGC ACGCCGCAAG GCACTCGCGG GGCCTGACTT TGGCAAGGAG CCGCTGGTCT TGCTGAACGA CACATTCGCG ACGCGCCGGT TCATCGATGA GCATTTTGCG CGTCACGCTA TTCGACCGCT TGTCGCAATC GAAGTGGATA CGGTCGGTGC AATCGTCGAG ATCGTGCGTC GCGGGCAGCT GGCGACGGTT CTCCCTGATC ACATCGCACG CGTGCAAGAG GGCCTACATC CCGTGCCGCT CGATCCCCCT CTGCCAACGC GTACGGCTGC CGTCTTAGAG CGCAAGGGTG CGTATCGCAC TGCAGCAAGC AGGGCGTTCT TACAGCTGCT GACTGAGCAG TTTGGAAAGC CGACGTGA
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Protein sequence | MLLRHIRYFL AVAEQKNFTR AAEALHVSQP TLSQQIRQLE DTLGTLLFDR SGRTVHLTDA GEAWMRYAKL ALQDLDAGVR AIHDVAELSR GSLRFAVTPT FTASLVGPVV DGFHQLHPGI RIDIRELTQD QMEAQLADDR LDIGVAFHPA FSVDIESQPL FAETLSLVVG RNHPRAARRK ALAGPDFGKE PLVLLNDTFA TRRFIDEHFA RHAIRPLVAI EVDTVGAIVE IVRRGQLATV LPDHIARVQE GLHPVPLDPP LPTRTAAVLE RKGAYRTAAS RAFLQLLTEQ FGKPT
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