| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5942 |
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| Symbol | |
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| ID | 4314847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 474743 |
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| End bp | 476293 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153782 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_777821 |
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| Protein GI | 115360684 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.050377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCC CGTATTTCCT GCGGCGCGCG GCGGCCTTCT GGGGTGACGT GCCCGCCGTG
ATCCATCGCG ACCGCCCGCT CACTTACCGG CAACTCGAGG CGCGTTCGAA CCAGCTTGCG
CACGCGCTTA TCGCCCTCGG TCTGCGGCGC GGCGACCGCG TGGCGGTGCA GTCGCGCAAC
TGCACGGAAC TGGTCGAGAT CGAATGCGCG CTGTACAAGA CGGGTCTCGT GAAAGCGGCG
CTCAACCCAC GCTTTACGAC GGCGGAAGCG TCGGACGTGG TGGAAAACTG CACGCCGCGC
GTGCTGATCG CGGGCCGCGG CTATACGGGC TATACGCGCG CCACGCCGGG TTTTGCGAGC
GTCGAGACGT TCATCGCCAT CGGCGGCGCC GAAGGCTATG TGGATTACGA AGCGCTGCTG
GGGCGGGCCG CTTCGCACGC GCCGGATTTT GCCAGCCACG CGGACGATCT CGCCGTGCTG
CATTTCTCGT CAGGCTCGAC CGGCAAGATC AAGGCCGCGA TGCAAAGCTA CGGCAACCGC
ATGGCGTCGC TGCGCAAGCT GCTGATCGGC ATGGACACGC AGCCGCGCCC CGGCGACCGG
CTCGCGCTCG TCGGGCCGAT TACGCATGCG TCGGGCATGC TCATGCAGCC GTTTCTCTAT
TGCGGCGCCA CGCTCGTGCT GTTCGACGCA TTCGAGACCG CGCAATTTCT CGCCGATCTC
GAACGCCTGC GCGTCACGCA CGTCTTCATG GTGCCCGCGA TGATCAACAT GCTGCTCAAC
GAGCCTGCGC TCGCGCACAC CGACCTGAGC GCGCTGAAGT CGCTCTCGTA TGGCGCCGCG
CCGATGGCCC CCGCGCGCAT TCAGGAGGCG TGGGCGCGCT TCGGGCCGAT TCTCTCGCAA
GGCTATGGCG CGAGCGAATC GACCTCGGGC GTCACGCGTC TCACGATTGC GGACCACGCG
TATGCGATCG CGCAGTGCCC GGAACGTCTC GCTTCGTGCG GGCGGCCGAT GGGCGAGACC
GAAGTGTGCG TGCTCGGCGA AGACGGGCGG CCGCTGGCGG CGGGTGAAGT CGGCGAAATT
GCCGTGCGCG GCGAGGACGT TTTCAAGGGC TACTGGGGCG CGCCCGAACT CACGGCCGAA
GTGCTCGTGA ACGGCTGGCT GATGACGGGC GATCTCGCGC GCACCGATGA AGACGGCTAC
CTGTATCTGG TCGACCGCAA GAAGGACATG ATCGTCTCGG GCGGCTTCAA CGTCTATCCG
ACCGAGGTCG AGGCCGTGCT CTATCAGCAT CCCGACGTGC TCGAAGCCTG TGTGTTCAGC
GTGCCCGACG AGCGCTGGGG CGAGGGCGTG AAAGCGGCGG TGGTGCTCAA GCCGCAACGC
ACGGCGAATC AGGACGCGCT GGTCGCGCAT TGCCGCAGCC TGCTCGCCGA CTACAAGCTG
CCGCGCTCGA TCAGTTTCGT CGCGGAACTG CCGCGCAACG CGAGCGGCAA GATCGCGCGC
AAGATGGTGC GCGAACAGTA CTGGCAAGGC GCGGAGCGGC GCATCAACTG A
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| Protein sequence | MSFPYFLRRA AAFWGDVPAV IHRDRPLTYR QLEARSNQLA HALIALGLRR GDRVAVQSRN
CTELVEIECA LYKTGLVKAA LNPRFTTAEA SDVVENCTPR VLIAGRGYTG YTRATPGFAS
VETFIAIGGA EGYVDYEALL GRAASHAPDF ASHADDLAVL HFSSGSTGKI KAAMQSYGNR
MASLRKLLIG MDTQPRPGDR LALVGPITHA SGMLMQPFLY CGATLVLFDA FETAQFLADL
ERLRVTHVFM VPAMINMLLN EPALAHTDLS ALKSLSYGAA PMAPARIQEA WARFGPILSQ
GYGASESTSG VTRLTIADHA YAIAQCPERL ASCGRPMGET EVCVLGEDGR PLAAGEVGEI
AVRGEDVFKG YWGAPELTAE VLVNGWLMTG DLARTDEDGY LYLVDRKKDM IVSGGFNVYP
TEVEAVLYQH PDVLEACVFS VPDERWGEGV KAAVVLKPQR TANQDALVAH CRSLLADYKL
PRSISFVAEL PRNASGKIAR KMVREQYWQG AERRIN
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