| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5939 |
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| Symbol | |
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| ID | 4314844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 470160 |
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| End bp | 472187 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638153779 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_777818 |
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| Protein GI | 115360681 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.428975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0291906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGC CGTTTTGTCC TGAGCGCGGC CGCGCTTTCG CCGCTCTTCC CCTGCGCAGG
GCCGCGAACC TTGCGCGTCT CTCATTTCAT CACGCCATGC AAAACACTCC GATTTCATCG
GCGCTTGCCG ATCTGCCCGT GCAGCGCGCG ACCGAGGCGA CTCGGCAAGC TAACCACCAC
GCGTTGCAGG CACTGCCCGC GAACGACGAT CTCGACATGG AGGAAGCGCA ACGCGGCTTT
ATCGGCACGC TTGCCGACGC CGAGATTCGC GATGCCTATG GTCGGCTTGT CTGGAGCATG
GCCGACTATG CGTTCCTCGA CGAAGAAACC GCGCCGCCCA CGGCGCATCC CGCGCTATGG
CGTCAGGCGC GGCTCAATTG CCTGCATGGG CTGTTCGAGG TCATGCCGCG GATTTATCAG
GTACGCGGCT TCGATCTCGC GAACATGACG CTGATCGAAG GCGATACGGG TCTCATCATC
ATCGATCCGC TCACGTGCCG CGAAACGGCG CAGGCGGCGC TCGAACTCTT CTACGCGCAC
CGGCCGCACC GGCCTGTTCT GGCCGTGATC TACAGCCATA GCCATACCGA TCACTTCGGC
GGCGTGAAGG GTGTGGTCGA CGAGGCACGC GTGCGCGCGG GCGAGGTCGC CGTGATCGCG
CCCGCGGGTT TCATGGAAGA GGCCGTCGCG GAAAACGTGA TGGCAGGCAC GGCCATGGAG
CGGCGCTCGC AATTCCAGTT CGGCCAGACG CTCGCGCGCA ATGCCTGCTG CCAGATCGAC
GCGGGGCTCG GCAAGACGAT GCCGAACGGC ACCGTTACGC TCATCGAGCC GACCCAGCTG
ATTCATCAGG AAAGCGAAAC ACATACGATC GACGGCATCG ACATCGTGTT TCAGTTGACG
CCCGATAGCG AAGCGCCCGC CGAAATGCAC TTCTTCTTTC CGCAATTGCG GGCGCTGAAC
GTGGCGGAGA ACGGCACGCG CACGCTGCAC AACCTGTGTC CGCTGCGTGG CGCGCAGGTG
CGCAACGCGA AGGCCTGGTC GCGCTATCTG CATCAGGCGC TCGAACGCTA CGCGGGCGGC
GCGGACGTCG TGTTCGCGCA GCATCACTGG CCTACGTGGG GCACCGCGCG CCTCACTTGT
TTTCTCGAAC AGCAGCGCGA TCTCTACAAG TACCTGCACG ACCAGACGCT GCGCATGATG
AATCGTGGCG GAACCGCCGC CGAAATCGCC GAACGGATGA CGCTGCCCGA TACGCTTGCC
GCGCAATGGC ATACGCGCGG CTATTATGGC ACTGTGTCGC ACAATGTGAA GGCGATCTAT
CAGCGCTACC TGAGCTGGTA CGACGGCAAT CCGGCGCATC TGCACGCCTT GCCGGACGAG
CTTTCCGCGC CGCGCTACGT GGAGTACATG GGAGGCGCCG AGGCGATGCT CGAACGCGCG
CGCCGCGATT TCGAGCGCGG CGAGTATCGC TGGGTCGCCG AGGTGATGAA CCGCCTCGTG
TTTGCACAGC CGACGCTGCG CGAGGCGCGT GAACTGGGCG CGGCGGCGCT TGAGCAAATG
GGCTTTCAGG CGGAATCCGC GACGTGGCGC AACGCCTACC TGCTTGGTGC GCGTGAACTG
CGCGAAGGCG CGGGAGCGGG GGCCGGACAG ACCATGCGTA GCCAGGACCT CGTGCGCGTG
CTGAGCGACG GCGCGTTTTT CGACTACCTG GCCGTGATGG TCGACGGCCC CAAGGCGCAG
ACGCTCAACA TTCGCATGAC GTGGCGCTTT ACCGACCGCG ATGCATGCTA TGCGCTGTAT
CTGAAGCATG GCGCGCTGAC CTGGTCGGCT ACGCCGCATC GCGAAGGCCA CGACCTGGAT
ATCACCATGA AGCGTGCCAC GCTCAATCGC ATCCTGCTCG GCGAGACGCA GTTCGGCGCC
GCGCTGGCGG AAGGCGAGAT CGTGCTCGAA GGTACCAAGG CGCTGTTCGG CGCGTTCCTC
AAGACGCTGG AAAAGCCCGA CGGGCGTTTT AACGTCGTCG AGCCGTGA
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| Protein sequence | MPKPFCPERG RAFAALPLRR AANLARLSFH HAMQNTPISS ALADLPVQRA TEATRQANHH
ALQALPANDD LDMEEAQRGF IGTLADAEIR DAYGRLVWSM ADYAFLDEET APPTAHPALW
RQARLNCLHG LFEVMPRIYQ VRGFDLANMT LIEGDTGLII IDPLTCRETA QAALELFYAH
RPHRPVLAVI YSHSHTDHFG GVKGVVDEAR VRAGEVAVIA PAGFMEEAVA ENVMAGTAME
RRSQFQFGQT LARNACCQID AGLGKTMPNG TVTLIEPTQL IHQESETHTI DGIDIVFQLT
PDSEAPAEMH FFFPQLRALN VAENGTRTLH NLCPLRGAQV RNAKAWSRYL HQALERYAGG
ADVVFAQHHW PTWGTARLTC FLEQQRDLYK YLHDQTLRMM NRGGTAAEIA ERMTLPDTLA
AQWHTRGYYG TVSHNVKAIY QRYLSWYDGN PAHLHALPDE LSAPRYVEYM GGAEAMLERA
RRDFERGEYR WVAEVMNRLV FAQPTLREAR ELGAAALEQM GFQAESATWR NAYLLGAREL
REGAGAGAGQ TMRSQDLVRV LSDGAFFDYL AVMVDGPKAQ TLNIRMTWRF TDRDACYALY
LKHGALTWSA TPHREGHDLD ITMKRATLNR ILLGETQFGA ALAEGEIVLE GTKALFGAFL
KTLEKPDGRF NVVEP
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