Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5938 |
Symbol | |
ID | 4314843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 469745 |
End bp | 470119 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638153778 |
Product | transport-associated |
Protein accession | YP_777817 |
Protein GI | 115360680 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.483865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.018454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAT CCACTCGCAT CCCATGCATC GCCGTCGTGG TGATGCTCGC CGCGCTCAGC GACTGCGCGA GCGCCCAACC GGTTGCCGCA GAAGCGGCGC CCTCGTCCGC GACCGGTACG AAGGCAGCCG CAAGCGACGT CAAAGCCGCC AGGGCCGCGA ACCGCAAGCT CGCGCACCGC GTGGAAAACG CACTGGCGCG CACGCGCGGC CTGAACTCCG CGCGCATCAT CGTGACGGTA CGCGGCGGAC ACGTCACGCT CTCCGGCGCC GTGAACTACA ACAAGCAGAT CACATTCGCG GTCGAGGCCG CGCGCAAGGT CGAAGGCGTC ATCGACGTCG ATAACCGCAT TCGCGTATCG GGCGCATCGC TCTGA
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Protein sequence | MKISTRIPCI AVVVMLAALS DCASAQPVAA EAAPSSATGT KAAASDVKAA RAANRKLAHR VENALARTRG LNSARIIVTV RGGHVTLSGA VNYNKQITFA VEAARKVEGV IDVDNRIRVS GASL
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