Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5935 |
Symbol | |
ID | 4314840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 466133 |
End bp | 466750 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638153775 |
Product | hypothetical protein |
Protein accession | YP_777814 |
Protein GI | 115360677 |
COG category | [S] Function unknown |
COG ID | [COG3644] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0497798 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAAGTTC GCCGATACCC GAAGTACACC GGCTTTCACG GCTCTCAGTG CTTCGCGTCC GGCTCGCTTC CGGTCGTCGT GACAGCCGCG CGTCACCTCA TGGAATACGG GACGGCGGGA GCGCTCCTGG TCATCGACAA CACGACCGGC TGCGCCATCG ACATCGATAT CTACCTGCCG ACTGCCGACA CCGGCCAGCC CACCCGTGCC GCCGACACGC CGGAAGCCGA TGACGAGGCG CGCCCGCGCG GGCTGCACGG CCGCGGCCGG CCCCGGCTCG GGGTGGTGTC GCGCGAAGTG ACGCTGCTGC CGCATCAATG GGCGTGGCTG GCCGCGCAAT CCGGCAACCT GTCCGCCGCC CTGCGCAAGC TCATCGAGAT GCAGATCCAG CGCCACCCGG CAAACGACCC CGGCTACGAA GCGCGGAAGC GGGCCTGTCG TTTCGTGTCG ACCATGGCGG GCGAATTGGA CGATACCGAT CGCGCCGTCC AGGCGCTGCT GTCGGACGAC CATGCGAGCC TGCTGAGCGC CGTCGAACAC TGGCCGCCCG ATGTGCGCGA TCACGCGCTG CTGCTCGCGA CGGAGGGCAG CGACTGGCGA TCGGCCGGCG AATCCTAG
|
Protein sequence | MKVRRYPKYT GFHGSQCFAS GSLPVVVTAA RHLMEYGTAG ALLVIDNTTG CAIDIDIYLP TADTGQPTRA ADTPEADDEA RPRGLHGRGR PRLGVVSREV TLLPHQWAWL AAQSGNLSAA LRKLIEMQIQ RHPANDPGYE ARKRACRFVS TMAGELDDTD RAVQALLSDD HASLLSAVEH WPPDVRDHAL LLATEGSDWR SAGES
|
| |