| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5933 |
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| Symbol | |
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| ID | 4314838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 463603 |
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| End bp | 464973 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638153773 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_777812 |
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| Protein GI | 115360675 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.650247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0243136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGGT TTGTGGAAAA AACCGCCACA TTGCCACCGT CGTCGACACG CGAGGCATTG
AAGATCTCGC TGCCGATCAT GATCTCGCAG TTCGTCGTGA TGATCGGTGG CTTCGTCAGC
AACTTGCTGC TGTCGCGCGT CGACGCCACC ACCTTCGCCG CCGGCCTGCT GATCAACGCG
GTGCAAATGC TGCTGATGAC GGTGGTGTTC GGCATGTTGT TCGCCCTGAG CCCGCTGATC
GGCCACGTGA AGGGCGAGGG CCGCGAGCCC GAGCGGATCG GGCATCTGTT CTCGGCGGCG
CTGGCAGTGG CGATGCTGTT GTGCGTGCCG ACCATCGTCG TGCTGCTGTT CATCGGCCCG
ATCCTCACGG CCCTGCACCA GCCGCCCGAG CTGGTCGGCG CCTGTACCGG CTTCTTCCGC
ATCTATGTTT ATTCGCTGCC GGCCGTCGGC ATCATCTCGG TCTGCGTGCA GCTGCTGTTG
GGCATCCTGA AGCAGGCCCT GGTGCTGCTC TACAGCCTCT GCAGCCTGTT GCTGACGACG
CTGCTCGGCT ACCTGCTGAT CTTCGGCAAG TTCGGCTTCC CGATGCTCGG CCTCGAGGGC
CTGGCCTGGG CGCAGTCGAT CACGGCCTGG GCGGCGGCGC TGGTGCTCGG CGGCTTCGTG
CTGAGCCACG GCAGCCACCG TCCCTACGGG CTGCTCGCGA TGCACGGACA AGCAGTCAAG
CAGGGCGTGA CGCGCATCGT CAAGGTCGGC CTGCCGATCT CGGTGCAGAT GGGCAACGAG
ATCCTGTCGT TCTTCGTGAC CACGGTGATG GTGGGCTGGC TCGGCATCGC CGCGCTGAAC
GTGCAGCAGG TCGCCACGCG CTACCTGCTG TTGCTGGTGA TCCCGATCGT CGGCCTGTCG
CAGGCGGCCA CCGTGGTGGC GAGCCGGCAC TTCGGCGGCG GCCGGCTCGG CGCCGTGAAA
GAGGTCGGCG ACGCCTACAC GCGCATGGGC GTGATCTATT CGCTGATCGT GCTGGCCGCC
TTCGCGCTGG TGCCGAGCCT GTTCGTGCGT GTATTTGTGG CCGACACGCC GGAGAACGCC
GGCATCTACC ACACGCTGTC GATCATCCTG GTGCTGATCG CCGTCGGGCA GATCTTCGAC
GCGGCGCGCA ACACCCTGAC GGGCGCGCTG CGCGGCCTGC AGGACACCAA GTTCCCGATG
AAGGTCAGCA TGATCCTGAT CTGGCCGGTG GGCGTGCCGC TCGCCTACGT GATGGGATTC
ACGCTTGGCT GGGGCCTCGT CGGCATCACC GTCGCGCACG ACCTCGTCAT GGCGGTCGGT
GCGCTGATCC TCTGGCAGCG CTGGAGAAAC CGTTTCCCTC GCCAGGCCTG A
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| Protein sequence | MNGFVEKTAT LPPSSTREAL KISLPIMISQ FVVMIGGFVS NLLLSRVDAT TFAAGLLINA
VQMLLMTVVF GMLFALSPLI GHVKGEGREP ERIGHLFSAA LAVAMLLCVP TIVVLLFIGP
ILTALHQPPE LVGACTGFFR IYVYSLPAVG IISVCVQLLL GILKQALVLL YSLCSLLLTT
LLGYLLIFGK FGFPMLGLEG LAWAQSITAW AAALVLGGFV LSHGSHRPYG LLAMHGQAVK
QGVTRIVKVG LPISVQMGNE ILSFFVTTVM VGWLGIAALN VQQVATRYLL LLVIPIVGLS
QAATVVASRH FGGGRLGAVK EVGDAYTRMG VIYSLIVLAA FALVPSLFVR VFVADTPENA
GIYHTLSIIL VLIAVGQIFD AARNTLTGAL RGLQDTKFPM KVSMILIWPV GVPLAYVMGF
TLGWGLVGIT VAHDLVMAVG ALILWQRWRN RFPRQA
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