| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5932 |
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| Symbol | |
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| ID | 4314837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 461512 |
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| End bp | 463527 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638153772 |
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| Product | quinate/shikimate dehydrogenase, putative |
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| Protein accession | YP_777811 |
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| Protein GI | 115360674 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0107565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGA CATCGACGCT CGCGAGCGTC GCGATACGGC TTGCCCTGTT CGGCGTCGCC
CTCGCTGGCG GCTCGCTGCA GGCCGCGCCT GGCTACGGCG GCGGCGAGGT CGAGTGGCCG
CAGTACGCGG CCGACCAGGC CTCGTCGAAA TACCTGCCGG TCGACCGGAT CAATCCCGGC
AATGTCCGTC ACCTGGTCCA GAAGTGGGTG TGGGACTCGC CCGACAACGC GATCGTGGCG
CAGGCCAATG CCGGCGGCAT GAAGCTCTGG CCGAACGCGA ACGAGGCCAC CCCGCTGATG
GCGGGCGGGC GCCTCTACGT GATCACCTCG CTCAGCGAGA TCGCGGCGAT CGACGCGGCC
ACCGGCAAGA CGCTGTGGGT CTTCAATCCG AAGAGCTACG TGGCCGCGGA CGGCACCAGC
TTCGCCTATC CGCCGAACAT CGGCTTCGTG CAGCGCGGCG TGTCGTACTG GAAGCATGAC
GGCGTGGAGC GGATCTTCTT CGCCACCGGC AGCGCGCTGC TGATCTCGCT CGATGCGCGC
ACCGGCAAGC CCGACAGCGG CTTCGGCAGC GGCGGCGTGA TCGACCTGAA GCAGGACCTG
CGCCGCAGCG TATCGCAGAC GCTGTACGGC ATGAGCTCGC CGCCGATCGT GTGCGGCGGC
GCGGTGATCA TCGGCTCGAA CATCCTCGAT TTCCCGCTCG CGCAGCCGAT GGCGCCGGGA
GACGTGCGCG GCTTCGACCC GCGCACCGGC CAGCTGCTGT GGACCTTCCA CACCGTGCCC
GAGAACGGCG AGACGGGCGC CTCCACCTGG GTCGGCAACG CCAACGTGAA TACCGGCGGC
GCCAATGTCT GGGCGCCGAT GAGCTGCGAC AGCGAATCGG GCATCGCCTA TCTGCCGGTC
AGCACGCCCG CGAACGACTA CTACGGCGGC CGGCGCGTCG GCGACGGCTG GTTCGGCGAC
AACCTGCTGG CGCTGCGCGG GCGCACCGGC AAGCTGGTCT GGAACTACCA GCTGATCCAC
CACGGGCTGT GGGACTACGA TCCGCCCGCA GCGCCGACGC TGTTCGACGT CTGGCACGAC
GGCCGGCTCG TGAAGGCGGT CGCGCAGGTC TCCAAGCAGG GTTTCGTCTA CGTGTTCGAC
CGCACCAACG GCAAGCCGGT CTGGCCGATC GTGGAGCGGC CCGCGCCGCC CTCGACGCTG
CCCAGCGAGG TGGTCTCGCC CACCCAGCCG ACCCCGACCA AGCCGCTGCC GTTCGATCGC
CAGGGCCTGG CCGACGACGA CCTGATCGAC TTCACGCCGG CGCTGCGCGC CGAGGCGCGC
GCCACCGCCG CGAAATACGT GCACGGGCCG CTCTACACGC CGCCCTCGCT CGACCAGACC
GCCACGGGCG GCACGCAGGG CACGCTGATG ATGCCCGGCA ATGTCGGCGG CAGCAGCTGG
ACCGGCGCCG CCTACAGCCC CGAGACGGGG TACCTGTACG TCCCCTCGGT AACCAAGCCG
TCGGTGATCG GCCTGTTCCC GTTCTCGACC GAGACGTACG CGGGCGTGCC GAAGATGCTG
ACCATGCCCG ACGGCCTGCC GATCTCGAAG CCGCCCTACG GGCGCCTGAC GGCGATCGAC
ATGCGCACCG GCGACCACGC CTGGATGCGC CCGGTGGGGC GCGGGCCGGT CGATCACCCG
GCGCTGGCGG GGCTCAAGCT CGGCCCGCTG GGCTGGGACC GCCGCAGCTT CTTCATCGCC
ACCAACGGCC TGCTGTTCGG CACGCAGGAG GGGATCGTGA CCGCGAACCC GACGCAGCTG
AGTCAGACCA CCACGCTGAA CCTGATCAAG AACGACGACG CCTACCTGTG GGCGCTCGAT
CCGCGCACCG GCCGCACGCT GCTCGAACTG CCAATGCGGT ACGGCAACGC CTCGGGCTCG
CCGATGACCT ACGTCACCGA CAACCGGCAG TACATCGTGG TGCCGGTCGG CGGCGGCGGC
AATCCCGCGC GGCTGGTCGC CTACGGTTTG CCCTGA
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| Protein sequence | MATTSTLASV AIRLALFGVA LAGGSLQAAP GYGGGEVEWP QYAADQASSK YLPVDRINPG
NVRHLVQKWV WDSPDNAIVA QANAGGMKLW PNANEATPLM AGGRLYVITS LSEIAAIDAA
TGKTLWVFNP KSYVAADGTS FAYPPNIGFV QRGVSYWKHD GVERIFFATG SALLISLDAR
TGKPDSGFGS GGVIDLKQDL RRSVSQTLYG MSSPPIVCGG AVIIGSNILD FPLAQPMAPG
DVRGFDPRTG QLLWTFHTVP ENGETGASTW VGNANVNTGG ANVWAPMSCD SESGIAYLPV
STPANDYYGG RRVGDGWFGD NLLALRGRTG KLVWNYQLIH HGLWDYDPPA APTLFDVWHD
GRLVKAVAQV SKQGFVYVFD RTNGKPVWPI VERPAPPSTL PSEVVSPTQP TPTKPLPFDR
QGLADDDLID FTPALRAEAR ATAAKYVHGP LYTPPSLDQT ATGGTQGTLM MPGNVGGSSW
TGAAYSPETG YLYVPSVTKP SVIGLFPFST ETYAGVPKML TMPDGLPISK PPYGRLTAID
MRTGDHAWMR PVGRGPVDHP ALAGLKLGPL GWDRRSFFIA TNGLLFGTQE GIVTANPTQL
SQTTTLNLIK NDDAYLWALD PRTGRTLLEL PMRYGNASGS PMTYVTDNRQ YIVVPVGGGG
NPARLVAYGL P
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