| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5923 |
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| Symbol | |
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| ID | 4314828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 433915 |
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| End bp | 439152 |
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| Gene Length | 5238 bp |
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| Protein Length | 1745 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 638153763 |
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| Product | beta-ketoacyl synthase |
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| Protein accession | YP_777802 |
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| Protein GI | 115360665 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.107249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAGGA CCGTGGCACA TTTTCTCGAT CGGATCGAAC AACTGTCGAA GCCGCAGTTG
CAGGCGCTCG CGCGTGCGAT GCGCGACGAG ATCCTGCAAC TGCGGCCCGA CGAGCGGGCG
GATGCCGCGC CGGCAGACAT TTCAGGGCTG GCCTACGAGA CGCGCTGGCA GATCGCGCCG
CCGGCCCTCG CCGCGATGAA CCCGGGCCGA GCCGGCGCGC CGCGCGTGCT GCTGCTGAAT
TGGCGCGACG CCGCCTGGCC GCCGGCCGGC TGCGCCGCGA TCGCCTCCTG CGTGACGGCG
AGGGCGACGC TCGATCCCGA CACCGGTTGG GCGCCCGAGG CACTCGCCGC GCAACTGATG
CGGCTCGCGC AGGCCTCGGG GCCGTTCGAC GCGATCGTGC TTGCCGTCGG CGGCGATGCC
CATGGCGCGG CGGCCCGCGG CGAGCCGGAT GCAGTGACGC TGGCCGCGCA CTGGGGCACC
GCGTTGGCGC TGGCCGCCGC GGTGGCCGGC CAAGTGGCGC CGGCGCGCCT GTGGTTCGTC
ACGCGCGGCG CCCAGTGCCT GCCCGACGAT CGCCTGCCGG CCGACCCGGC GCTGGCGCCG
CTGGCCGCGC TGGGCCGCAC GCTCTCGCTC GAACTGCCGG CCGCCTGGGG CGGCTGCCTC
GATCTCGACG AGGCGCCCTC CTCGCTCGAA CGTGCCTTCG ACGAGATCGC CCGCGACCCG
GGCGGCAGCG ACGACGAAGT CGCCTATCGC GCCGGCCAGC GCTACCTGCC CGTGCTCGAA
CGCGTGTCCG AGGCGCCGCG CGCGCCCTTC GTGCCCTCGT CCGAGGCCAG CTACCTGGTT
ACCGGCGGCA CGGGCGGCAT CGGCACCGTG CTGGTCGACG ACCTGCTCGC GCGCGGCGCG
GGGCGCGTGG TGGTGCTCGG GCGGCGCGCC CCCGCCGCGC CCGAGGCGGC GGCATGGCTG
GCCGCGCGAC GGCGCGCCGC CGGCCGGGAC GAACGCGTCA TTCTGGTCGC GGCCGATCCC
GCCGACCGGG CCGCGCTCGG CGCGGCGCTC GACGATATCC GCCGCAGCGG CCCGCCGCTG
CGCGGCATCT TCCACGCGGC CGGCAGCAAC GAACGGATCG CGCTGGCGCG CCTCACGCGC
GACGACATCG CGCGCATCGT CGGCGCCAAG GCCTTCGGCG CGCTGCATCT CGATCAGCTG
ACGCGCGAGG ACGCGCTCGA TTTCCAGGTC TACTTTTCGT CGGTCGCCGG CCGCTGGGGC
ACCGCGCAGA TGGCACCCTA CGCGATGGCG AACCGCTTTC TCGACGCGCT GGCCGAGCGC
CGCGAGGCCG AGGGACGCCG CACGCGCAGC CTGGCCTGGG GGCCGTGGGC CGAGGTCGGC
ATGATGGTCC GGCAGCGGCA GCAAGGCTTC GGCGCGCTCG GGCTGCGCGC GCTCGCGCCG
GGGCTCGGGC TCGCCGCGCT GGCGCAGGCG CTCGGCCAGC CCGGCATCGC CGGCGCCACG
CGGCAGATCG TGGATGTCGA TTGGCCGTGT TATGCCGAGC AGGTCGCGGT GGCCAAGCAT
CTGCGTCCGT TCGCTGCCCT GAGCGCCGCT GCGTCGGCGG CTTGCGCGAC GGCATCCGGT
GCCGCGCCGC CGCTCGACGC CGTGCCTTCC GCCGCCGAGG ATTTCGGTCA GGCCGGGGCA
ACGCTGGCCC TGCTGCGCGA ACTGGTGGCC GAGCTGACCG GCGCGGCGCT GCCCGAGCGC
GGCGAGGCGC GGCCGATGCA GGAACTCGGA CTGACCTCGC TGCTGAGCAT CGAGCTGAGC
CAGAAGCTGC GCCAGCGCCT AGGCGTGCCT TGCCGCCCGA CCGTGGTGTT CGATCATGCC
AACCTGCGCG CGCTGGCCGA GTCGCTGGCG CAGGCCTGGG CGCACGCCAA TCCGCGCCCG
GCGGTGGCGC TCGCGCGGGT GGGCGCCGCC AGCGCCCGTG CCGCCGATGC CGACGAGGGT
GCGATCGCGA TCGTCGGCAT GGCCTGCCGG CTGCCCGGCG CCGATTCCCC TGACGCGCTG
TGGGCCCAAC TGATGCAGGC CGAGGCCGTC GCGCTCGACC CGGTCGAGTC GAGGCCCGCC
GCGCGCTTTG ACCTCGCGCG CTACCTGTCC GACGAGGATG CGCCGGGCAA GGCCTACAGC
CTCGCGGGCG GCTTCCTCGA CGACTTGGAG CAGTTCGACC ACGCGCGCTT TCGTCTTTCG
CATCGCGAGG CCTGCTTCAT GGACCCGCAG CAGCGGCTCG CGCTGGAGAC CACCTGGCGC
GCCTTCGAGG ACGTCGGCAT CGATCCCGCT GCGCGGCTCG ACGGCAGCGC CGCCGACGCG
CTCGACGCGG CCGTGTTCTT CGGCATCGGC CAGAACGAAT ACGGCCCGCT GTGCCGCTCG
GTGGCCGACG GCGAGGATGC CGGGCTGATG TCGACCGGCC AGTCGATGAA CATCATCGCC
GGGCGCGTCG CCCACCTGTT CGGTCTGGAC GGCCCGGCGA TCTGCCACGA CACCGCCTGC
TCGTCCTCGC TGGTCGCGCT CGACGCAGCG GTGCAGCACC TGCGGGGCGG CCGCAACCGG
CTGGCCGTGG TCGGCGGCGT CAACGCGCTG GTCTCGCCCG ACACCTTCGT GCTGCTCGGT
AAGGCGCGCG CGCTGTCGCG GCAGGGCCGC TGCGCCGCGT TCGACGCACG CGCCGACGGC
TACGTGCGCG CCGAGGGCTG CGTGGTGATG GTGCTCAAGC GGCTGGCCGA CGCGCGCGCC
GACGGCGACG CGATCCATGC CGTGATCCGC GGCAGCGCGG TCAACCACGA CGGCCGCAGC
AGCGGACTGA CCGCGCCGAG CGGCGCGGCC CAGGAGCGCG TGATGCGCGC CGCGCTGCGC
GACGCCGGCG TGGCCGCGCA CGAGGTGGCG CTGGTCGAGG CGCACGGCAC CGGCACCGCG
CTCGGCGACC CGATCGAATA CCACGCGCTG CGCGCCGTCT ACGCCGACGA TGCGCCGCGC
GCCACACCGC TGGTGCTCGG CGCGCTGAAG TCTTTCATCG GCCATACCGA GGCCGCCTCG
GGGCTGGCCG GCCTGCTCAA GCTGGTGCTG AGCCTGCGTG CGCGCATCGC GCCCGCGCAG
CGGCACTACG TCACGCCGAA CCCGTTCATC GAGACCAGCG AGCGGATCGA GATCCCGCGT
GGCGCGCGCG CGCTCGGCGG TGACGGGCGC GTGCTGGGCG CCGTCAGCGC TTTCGGCTTC
AACGGCACCA ATGCGCACGT GATCGTCGAG CGCGGCGAGG AGCGGCCCTC GCGGCGCCTG
CCCGGCGCGC CGTTCGCGCG GGTGCGCTGC TGGTACTCGG CGCGCCCGCT GTCGGCCAGC
AGCGGGCTCG CGCAGGCCTT CGGTGCCGCG CCGGCGAGCC TCGCGCCGGC CAGCTACGTG
ACGCGCTGGG CGCCGTTCGC GGCCCCGGCC GCCGTCGCGA TGCGGCAGGT GCTGGTGCTG
CGCATGCCGG TCGCGGCCGG TGATCCCCTG TACGACGCGC TGGATCGCGG CCTGATCGAG
GCGATGCGCG CGCGCGGCAT CCGCGTGATC GAGGCCGACG GCGAGCCGGC CCCGGGCCTC
GGCCTGGCGG CGGTGCTGGC CGCGCAGACA GCCGCGCACG GTCGCTTCGA GCGCATCGTG
CTGCGTCTCG GCGACGGCGC CGCCTGGCCC GACGCGGCGC TCGACACGGC CTGGCTGGAG
CGCCTCGGCC ACGGCTGGTC CGCGCTCGCG AGCCTGCCGG CCGAGGCCCC GCCGGTGCTC
GTGAGCGGCG CCGCGCAACC GCGCTGGCCG GCGGTGCTGG CCTGCGTCGA CAAGGAGCGC
GCGGGGCCGG CCCTCACCTG GCTCGACTGC GAACCGGGCC TTGGCGAGGC CGGGCTCGAC
AGCCTGCTCG ACGCCCATCT CGATGCGCTG CTCGCGATCC GCGAACCGGC TTGCCGGCTC
ACGCGCGCGG GCCTCGTGGT GCCGCGCCTG GCCGCCGCCG CGCCGCTGCC TGCCGCCGCG
TTCCGCGCGC GCGACGCGCA TGCCTATCTC GTCAGCGGCG GGCTCGGCGG GGTCGGCGCG
CGCGTGCTCG GCTGGCTGCT CGAACAAGGC GCGCGTCATG TCGTCAGCCT GAACCGCCGC
GCGCCCGATG CCGCCGAAGC AGCCGCGCTC GAGCGCCTGG CTCGACGCCA CGCCGCGCGC
ATCGACACGC TGGACCTCGG CCTCGACGAT CCCGAGGCCT TGCGCGAGGC GCTGCGGGCC
ACGCTCGGCG GCACGCCGTT GGCCGGCGTG TTCCATTGCG CCGCCGTGCT CGACGACCAG
CCGTTCGCGG CGCAGGCCTG GGACGCGGCG CGGGAGGTGC TGCGGCCCAA GGGCGCCGGC
GCCTGGCATC TGCACCGCGC CACGCTGGGC CAGCCGCTCG ATCACTTCGT GGTGTTCTCC
TCGCTGTCGG CGCTGCTCGG CCAGCCGGGG CAAGCCGCCT ACGCGCTGGC CAATGCGCTG
GCCGAGGCCG TGGTCGAACG GCGCCGCGCA CTCGGCCTGC CCGCGCTGGC GATCCAATGG
GGGCCGTGGG CCGGCGTCGG CATGGCGGCG CGCGGCGGCG AGGCGCTGGC CGCCCAGTAC
CGCGCGATCG GCCTGGCCGC GCGCGGCGCC GACGACTATC TGCGCGTGCT GTCGGCGCGG
CTCGCGTCCG GCGCGGGCCA GGAAGCCTGC GTCGGCGTGT TCGATCTCGA CTGGCGGCGC
CATGCGGCCA CCTACGCGCC GGCGCCGCTG TGGGCCGGGC TGCTGGGCGA TGGCGGCGCG
CCGGCCGAGC CGCCCTCGTT CGCCGAGCGG CTCGCCGAGG TGCCGCCCGA GCGGCGCCGG
CGTGCCCTGC GCGCGCGGCT GCGCGAGATC GTCGCCGCCT GCATCGGGCG CGACGCCGCC
GCGATCACCG ATACCGACGG CTTTGCCGAG ATCGGCATCG ATTCGCTGCA CGCCACGGTG
CTGCACCGGC AGCTCGAACG CGAATTCGGC GCCGCGCTGC CGGCCACCAT CGCCTTCGAT
CACCCCACGG TGGCCGCCGT CGCCGACTGC CTCGCGCGCG GTGCGCTGGC CGAGCTGTTC
GCGCCGGCCA TCGTGGCCGC GCCGGCGCAG CTGGCGAACG CCGCGGCCGA CGCATCGCTG
GGGGACCACA GTGCCGCCGA ACTCGCCCGG ATCCTCGCGC ACGAGCTCGG CGGTCTCGAA
TCACGCGGAG CACTTTGA
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| Protein sequence | MGRTVAHFLD RIEQLSKPQL QALARAMRDE ILQLRPDERA DAAPADISGL AYETRWQIAP
PALAAMNPGR AGAPRVLLLN WRDAAWPPAG CAAIASCVTA RATLDPDTGW APEALAAQLM
RLAQASGPFD AIVLAVGGDA HGAAARGEPD AVTLAAHWGT ALALAAAVAG QVAPARLWFV
TRGAQCLPDD RLPADPALAP LAALGRTLSL ELPAAWGGCL DLDEAPSSLE RAFDEIARDP
GGSDDEVAYR AGQRYLPVLE RVSEAPRAPF VPSSEASYLV TGGTGGIGTV LVDDLLARGA
GRVVVLGRRA PAAPEAAAWL AARRRAAGRD ERVILVAADP ADRAALGAAL DDIRRSGPPL
RGIFHAAGSN ERIALARLTR DDIARIVGAK AFGALHLDQL TREDALDFQV YFSSVAGRWG
TAQMAPYAMA NRFLDALAER REAEGRRTRS LAWGPWAEVG MMVRQRQQGF GALGLRALAP
GLGLAALAQA LGQPGIAGAT RQIVDVDWPC YAEQVAVAKH LRPFAALSAA ASAACATASG
AAPPLDAVPS AAEDFGQAGA TLALLRELVA ELTGAALPER GEARPMQELG LTSLLSIELS
QKLRQRLGVP CRPTVVFDHA NLRALAESLA QAWAHANPRP AVALARVGAA SARAADADEG
AIAIVGMACR LPGADSPDAL WAQLMQAEAV ALDPVESRPA ARFDLARYLS DEDAPGKAYS
LAGGFLDDLE QFDHARFRLS HREACFMDPQ QRLALETTWR AFEDVGIDPA ARLDGSAADA
LDAAVFFGIG QNEYGPLCRS VADGEDAGLM STGQSMNIIA GRVAHLFGLD GPAICHDTAC
SSSLVALDAA VQHLRGGRNR LAVVGGVNAL VSPDTFVLLG KARALSRQGR CAAFDARADG
YVRAEGCVVM VLKRLADARA DGDAIHAVIR GSAVNHDGRS SGLTAPSGAA QERVMRAALR
DAGVAAHEVA LVEAHGTGTA LGDPIEYHAL RAVYADDAPR ATPLVLGALK SFIGHTEAAS
GLAGLLKLVL SLRARIAPAQ RHYVTPNPFI ETSERIEIPR GARALGGDGR VLGAVSAFGF
NGTNAHVIVE RGEERPSRRL PGAPFARVRC WYSARPLSAS SGLAQAFGAA PASLAPASYV
TRWAPFAAPA AVAMRQVLVL RMPVAAGDPL YDALDRGLIE AMRARGIRVI EADGEPAPGL
GLAAVLAAQT AAHGRFERIV LRLGDGAAWP DAALDTAWLE RLGHGWSALA SLPAEAPPVL
VSGAAQPRWP AVLACVDKER AGPALTWLDC EPGLGEAGLD SLLDAHLDAL LAIREPACRL
TRAGLVVPRL AAAAPLPAAA FRARDAHAYL VSGGLGGVGA RVLGWLLEQG ARHVVSLNRR
APDAAEAAAL ERLARRHAAR IDTLDLGLDD PEALREALRA TLGGTPLAGV FHCAAVLDDQ
PFAAQAWDAA REVLRPKGAG AWHLHRATLG QPLDHFVVFS SLSALLGQPG QAAYALANAL
AEAVVERRRA LGLPALAIQW GPWAGVGMAA RGGEALAAQY RAIGLAARGA DDYLRVLSAR
LASGAGQEAC VGVFDLDWRR HAATYAPAPL WAGLLGDGGA PAEPPSFAER LAEVPPERRR
RALRARLREI VAACIGRDAA AITDTDGFAE IGIDSLHATV LHRQLEREFG AALPATIAFD
HPTVAAVADC LARGALAELF APAIVAAPAQ LANAAADASL GDHSAAELAR ILAHELGGLE
SRGAL
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