Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5917 |
Symbol | |
ID | 4314822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 400483 |
End bp | 401430 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 638153757 |
Product | phosphopantetheine-binding |
Protein accession | YP_777796 |
Protein GI | 115360659 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00147293 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGTGAGCG CACCGCGCCA GGCTGTGCTC CCTGCTTCCC CGACCGTTTC CAACCAGGCT GACGACGCCA TGACCCTCGC TACCCTGCAA GCCGCCGAGA CGGCGGACAT CATCGTGCTG TCGGCGCCCG GCGTCGACGC GCTGCGCGGC GCCGTCTGGC AGCTGCTGGG CCAGCTGCGC GCGCTCGCGA GCGACGCCGC GGCCGAGCCG TTCACGCTGG CTGACCTCGC CTACACGCTG AAGTCGCGCC CCGAGGCCGG CGGCTGCCGC GTCGCCTTCG TGACGCGGCA GCTCGATGAC CTCGCGGCCG GCCTCGAGCA CTACCTGCGC GCGCATGCGC AGGCCGAGGC GAGCGTGCCG CGCAGCGTGA CGCCCGGCCG CCACGGCGAA CTGGTGACCA TCCTGCGCGG CGACCTGGCC GCCGATTCGG GCACGGCGCG CCTGCTCACG GGCGCGGCGG CCGCGACCAT GGCGCGCGCG CTGTGGGCCG CGCGCGACCT CGAGAACCTC GCGCTGATCT GGGTGCGCGG CGGCCAGCTC GACTGGGACG CGCTGCGCGA GGGACCGCCG CCGCGGCGCC TCGCTTGGCC CGACCAGGCG CCGCTCGAGG CCGGCGCGCG GCCGGCGCCG GAAGCCTTCG AGGGCGCCGC CGCGGGCGTC TCGGCGGCCG GCATCGAGCC TGACCTGACG GCGATCTGGC AGGCGCTGTT CGCCCTGCCG GCGGTTGGCC GCCACCAGGA TTTCTTCGCG CTCGGCGGCG ATTCGCAGCT GGGCCTGCGC ATGCTGGCCC AGCTGCGTGA GCGCCACGGC GTCGACCTGC CGCTGCGTTG CCTCTACGAG GCGCCCACCG TCGCCCGCCT GGCCGAGACG ATCGTGCGGC TCGCGGCGCC GGCGCCTTCG GGCGACCAGG ACGATGCATC GGAGTACGAA GAAGGCGTGA TCCGCTGA
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Protein sequence | MVSAPRQAVL PASPTVSNQA DDAMTLATLQ AAETADIIVL SAPGVDALRG AVWQLLGQLR ALASDAAAEP FTLADLAYTL KSRPEAGGCR VAFVTRQLDD LAAGLEHYLR AHAQAEASVP RSVTPGRHGE LVTILRGDLA ADSGTARLLT GAAAATMARA LWAARDLENL ALIWVRGGQL DWDALREGPP PRRLAWPDQA PLEAGARPAP EAFEGAAAGV SAAGIEPDLT AIWQALFALP AVGRHQDFFA LGGDSQLGLR MLAQLRERHG VDLPLRCLYE APTVARLAET IVRLAAPAPS GDQDDASEYE EGVIR
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