| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5916 |
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| Symbol | |
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| ID | 4314821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 399149 |
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| End bp | 400390 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638153756 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_777795 |
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| Protein GI | 115360658 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.628752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00179215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCAAGCC AAGCACAGTT GCAACCCCTG AAGGGCATCC GCGTGGTCGA CTACACGCAC
TTCCTGGCGG GCCCCTATGT CTCGCGTTGT CTCGCCGCGC TCGGCGCCGA CGTGATCAAG
GTGGAGCGGC CCGCCGGCGG CGACGCGGGC CGCGCGCATC CCTACTTCAT CCAGGGCGAG
AGCGGCTATT TCCTGCAGCA GAACATGGGC AAGAAGGGCC TGTGCGTCGA CGTGAAGGAT
CCGCGCGGGC TCGCGCTGAT GAAGAGGCTG ATCGGCGAGG CCGACGTACT GGTCGAGAAC
TACCGGCCCG GCGCGCTCGC CAAACTCGGG CTCGGCTACG AGGCCTGCGC CGAGACGAAC
CCGGGGCTGG TCTACTGCTC GGTGTCGGCC TATGGCCAGA CCGGGCCGCG CTCGCAGCAG
GCCGGCTTCG GCCTGATCGC CGAGGCGATG AGCGGGGCGA TGGACCTGAT CGGCAATCCC
GACGAGACGC CGCCGCTGTT CCGCATGCCG GTGGCCGACA TGTACGCGGG CAGCCACGGT
GTGGCGGCGG TCTGCGCGGC GCTGCTGGGC CGGGCGGCCT CGGGGCGCGG CCAGCACATC
GATCTCGCGC TCTACGACTG CATGGTGTCG ATGCACGACT ACGCGGTGCA GTGCCACACG
CTGAGCGGCG GCGAGGAGCG CATGACGCGC AGCGGTCACT ACCTGCCGCA ATCGACCGTC
TACGGCGTGT TCGCGACCCA GGACGGCAGC GTGGTGATCG CCGCGCAGGT CGACGACGCC
TGGCGGCGGC TGGCGCGCCT GATCGGCGGC GCGGACCTGG CCGAGGATCC GCGCTTCCTC
GATGCGGCCA GCCGCAACGC GCACGGGCGC GAGGCCGTCG AGCTGGTGCA GGCCTGGAGC
CGCGCGCGCA GCGCCGAGGA CTGCCTGGCC GCGCTCGAGG CGGCCGGCGT GCCGGCCGCG
CCGGTGCAGC GCATCGATCA GGTGCTGGGA GACCCGCACG TCGCGGCGCG CGGCATGCTG
ATCGAGCAGC AGCATCCGGT GCTCGGCACG ATCCGGCTGC CGAACGTGCC GTTCCGCTTC
TCCGGCTTCG AGCCGCCCGA GATGCGCGTG GCGCCCATGC TGGGCCAGCA CAATCGCGAG
ATCGCCGCCG AGCTCGGTTA CGCGGAGCAC GAGATCGACC GGATGGAGGG CGACGGCGTG
CTGTTCGCGC CGGCGCGCGT GCCCGAAGCG GCAAGCCTGT GA
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| Protein sequence | MSSQAQLQPL KGIRVVDYTH FLAGPYVSRC LAALGADVIK VERPAGGDAG RAHPYFIQGE
SGYFLQQNMG KKGLCVDVKD PRGLALMKRL IGEADVLVEN YRPGALAKLG LGYEACAETN
PGLVYCSVSA YGQTGPRSQQ AGFGLIAEAM SGAMDLIGNP DETPPLFRMP VADMYAGSHG
VAAVCAALLG RAASGRGQHI DLALYDCMVS MHDYAVQCHT LSGGEERMTR SGHYLPQSTV
YGVFATQDGS VVIAAQVDDA WRRLARLIGG ADLAEDPRFL DAASRNAHGR EAVELVQAWS
RARSAEDCLA ALEAAGVPAA PVQRIDQVLG DPHVAARGML IEQQHPVLGT IRLPNVPFRF
SGFEPPEMRV APMLGQHNRE IAAELGYAEH EIDRMEGDGV LFAPARVPEA ASL
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