| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5909 |
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| Symbol | |
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| ID | 4314814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 391183 |
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| End bp | 392814 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638153749 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_777788 |
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| Protein GI | 115360651 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0340398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00203075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCACGCGC ACGGACACGG TCCGGGCGCA GGCCGTTACC GTGCACCAGA CGAGCGCAAG
CCGCGGATGT GCGAGCATCC GTTGTCGGCT ACGTTAAAAT ACCCGATACA AAAAAATAGA
CAAACATCGA TCTTCGCGAT GCCCCCGGCA GGATGCCGGC GCGGCGCGGT CGCGCAACCC
GGTGTCTGTC GATTTTTCAC CCGCCACTCA GAGGTACTTC ATGTCCACCG CCGGTTCCCG
AAAAACGCGT CTGCGCGGCG CGCGCTTCGA CTTCGACAGC ATTGGCGAGC GCTTGCGCGC
GTACCGGATG GCTGCCGAGT TGCGCAGCGA GGATGTCGCC GAGCGCCTGA ACATCTCGCG
CGCGGCGGTC TACAAGCTCG AACGTGGCGA GATTGTAAAG ATCGATACGC TCGAGCGGCT
CGCCGCGCTG TTCGGCGTGT CGCTCGCGAA CCTGATGGGC GTCGAGGTCG AGTATCACGA
TTCGGCGATC AGCTATTTCG AGCGCATGCG GCAGATCGAG AGCCGCTCGC AGCGGATCTT
CGCGCATTTC GATCCGTTCT CGTTCCTGCT GACCTCCGAC GATTACGACG GCTGGCTGCG
CCAGATGCTC GAGGAAAGCA TCCCGCCGTC GCTGACCGAT GCCGCGTGGC GGCAGACGCT
GTCGAAAGTG ATGGCGATCC TCGCGGACCG GAAAGCCGCG TTCCGGCGCG CACCGCTGAA
CGTGACGAGC CTGATCGGGC TGCGCCAGAT CGAGCAGTTC CTGCACCACG GCCTGGTCGG
CCGCCTCGGG CTGCCGCCGG GCGTGCAGCT CGAGCGCAAG CTCGCCGCGC GGCGGGAAGT
GATGCGGATT GTCGGGATGC TCGAGGACGA TGCGAAAGGC GTGCGTATCG GCATCGTCAG
CGACAACCTG CCGAACGAGA CCTTCCAGAT CTTCGAGGAC GACGACAGCG CGCATATCGC
GGTATCGCCG TTCCGGCTCG GCGAGCTGCC GAACATTCGT ACCGGCATCG CGACGATCAC
CACGTCGGCG GATGCCGTCG CGATGTACCG GAAGATGATC GACCGGCTGT GGACCGATTC
CACGAAGGGG GCCGACGGGG CCAGGCTGCT CGTCGACCTG CTCGACCGGG CGTAGTGGGG
CGGCGTGTCG ATCATGCGCG ATTCCGGTTG ATGCGCATCG CGCGAGCTCG TGCTCGGCGT
TGCCTATGCG CTCCTGCAGT TCACGCCGAG CGTCGTCGAC GCCGAGGAAG CCGTGGTGGT
GCTCGACGTG ACGGCGAGCC TGCGCCTGTT CCACGGCATC CGCGCGCTGC GCCAACGCGT
GCGCGACGTC GTCGCATCGT TGCTCGACTG GCTCGACCAA GCCGCCGGCG TCGCGCCGGC
CGCCTACGAC TGGCTAGAAA TGCCGCCGTC GTTCGATACG CGCGTCGAAC TGATGGACCG
CGTCGAGCAC GCCGAGGCGC TGCTATTCGT CGCGCGCCGG CTGATCCTGC GGCTGACCGG
CTGGCTCACC GCGAAGCAGC TGGACGCTTG AGCCGATCGT TCTCCGATTC CAGTTATTCG
CATCGCACAA CCTCTCAGTT CCAATTCGTC GCCCGTCATC TCAATGACTT GATTTTGCAA
CGCAAGATTT AA
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| Protein sequence | MHAHGHGPGA GRYRAPDERK PRMCEHPLSA TLKYPIQKNR QTSIFAMPPA GCRRGAVAQP
GVCRFFTRHS EVLHVHRRFP KNASARRALR LRQHWRALAR VPDGCRVAQR GCRRAPEHLA
RGGLQARTWR DCKDRYARAA RRAVRRVARE PDGRRGRVSR FGDQLFRAHA ADREPLAADL
RAFRSVLVPA DLRRLRRLAA PDARGKHPAV ADRCRVAADA VESDGDPRGP ESRVPARTAE
RDEPDRAAPD RAVPAPRPGR PPRAAAGRAA RAQARRAAGS DADCRDARGR CERRAYRHRQ
RQPAERDLPD LRGRRQRAYR GIAVPARRAA EHSYRHRDDH HVGGCRRDVP EDDRPAVDRF
HEGGRRGQAA RRPARPGVVG RRVDHARFRL MRIARARARR CLCAPAVHAE RRRRRGSRGG
ARRDGEPAPV PRHPRAAPTR ARRRRIVARL ARPSRRRRAG RLRLARNAAV VRYARRTDGP
RRARRGAAIR RAPADPAADR LAHREAAGRL SRSFSDSSYS HRTTSQFQFV ARHLNDLILQ
RKI
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