Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5906 |
Symbol | |
ID | 4314811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 388171 |
End bp | 389418 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638153746 |
Product | major facilitator transporter |
Protein accession | YP_777785 |
Protein GI | 115360648 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.544672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0068458 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAGCGA ACCTTCGATC CTCCGCTGCC GCGCCCGCCG ACGCACCGCC CGAACGGGTG TCGCGCTACG CGTGGAAAGT GCTGGCCGGC TCGGCCATCG GCTATGCGAT GGACGGCTTC GACCTGCTGA TCCTCGGCTT CATGCTGCCG GCAATTGCGG CGTCGCTGCA CCTCGGCGCG CAGCAGGCGG GGGCGCTCGT CACGTGGACG CTGATCGGCG CGGTCGCGGG CGGCGTGATT TTCGGCGCGC TCAGCGATCG CTACGGCCGC GTGCGCGTGC TGACCTGGAC GATCCTGCTT TTCGCGGTGT TCACCGGGCT GTGCGCGTTC GCACAGGGCT TCTGGGATCT GCTCGCGTAC CGGACCATCG CCGGCATCGG CCTCGGCGGC GAATTCGGCA TCGGCATGGC GCTCGCGGCC GAAGCGTGGC CTGCAGCCAA GCGCGCCCGC GTGTCGTCGT ACGTGGCGCT CGGCTGGCAG AGCGGCGTGC TCGCGGCGTC GCTGCTGACG CCGCTGCTGC TGCAGAGCGT CGGCTGGCGC GGCATGTTCG CGATCGGCGT GCTGCCCGCG ATCGTCGCCT GGGTGCTGCG CAACAAGCTG CACGAGCCGG AAGTGTTCGT CCGGAGCCCG CAGCCGGCGC GCACGGGCGC GCGTTTCCGG CTGCTGTTCG CCGATGCGCG CACGACCCGC ACGAGCATCG GCATCGTCGT GCTGTGCGCG GTGCAGAACT TCGGCTACTA CGGAATCATG ATCTGGATGC CGACGTTCCT GTCGAAGCAG CTCGGCTTCT CGCTGACGAA ATCCGGATTG TGGACCGCCG TGACGGTGCT CGGGATGATG GCCGGCGTCT GGCTGTTCGG ACACCTGGCC GACCGGATCG GCCGCAAGCC GACGTTCCTG CTGTACCAGC TCGGCGCGGT GGCGATGGTA TTCGCGTATT CGCGGCTGAC GGACCCGGCC ACGATGCTGT GGGCCGGCGC GCTGATGGGC ATGTTCGTGA ACGGCATGGT CGGCGGCTAC GGCACGCTGA TGTCCGAAGC GTACCCGACC GCGGTGCGGG CGACCGCGCA GAACGTGCTG TGGAACGTCG GCCGTGCGAT CGGCGGCCTC GGGCCGCTCG TCGTCGGCGC GCTCGCCGCG CGCTATTCGT TTCAGATCGC GATCGCGATG CTGGCCGCGC TGTACGTGCT CGACATGATC GTCACGGTCA CGCTGATTCC GGAACTGAAG GACCGCGCGC TCGACTGA
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Protein sequence | MEANLRSSAA APADAPPERV SRYAWKVLAG SAIGYAMDGF DLLILGFMLP AIAASLHLGA QQAGALVTWT LIGAVAGGVI FGALSDRYGR VRVLTWTILL FAVFTGLCAF AQGFWDLLAY RTIAGIGLGG EFGIGMALAA EAWPAAKRAR VSSYVALGWQ SGVLAASLLT PLLLQSVGWR GMFAIGVLPA IVAWVLRNKL HEPEVFVRSP QPARTGARFR LLFADARTTR TSIGIVVLCA VQNFGYYGIM IWMPTFLSKQ LGFSLTKSGL WTAVTVLGMM AGVWLFGHLA DRIGRKPTFL LYQLGAVAMV FAYSRLTDPA TMLWAGALMG MFVNGMVGGY GTLMSEAYPT AVRATAQNVL WNVGRAIGGL GPLVVGALAA RYSFQIAIAM LAALYVLDMI VTVTLIPELK DRALD
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