Gene Bamb_5905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5905 
Symbol 
ID4314810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp387265 
End bp388131 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content73% 
IMG OID638153745 
Productoxidoreductase FAD-binding subunit 
Protein accessionYP_777784 
Protein GI115360647 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.383588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00602211 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGTGA TCGACGGGGC GCGCGCCTGC GCGCAGCCGT GGGCGGCCAC GGTCGCCACG 
CACGCGTGCG ACGTGGTCGC GCATCGCGCG GTGAACCGGC GCTATCGCTA TCTGCGGGTG
CGCGCCGACG CGCCGCTCGC GAGCGTCACG CAGGCCGGCC AGTTCTATCA GCTCGTCTGC
CCCGTCAGCG ATCTGCACCG GCCATTCCTG CCGCGCCCGA TGAGCGTGTA CGGCGTCGGC
CCCGGCGCCG GCGAAATCGA GTTCCTGTAC AACGTGACCG GCGAAGGCAC GCGTGCGCTC
GCGCAACTCG GCGTCGGCGC GCGGCTGTCG ATCGTCGGGC CGCTCGGTCG CCCCTTCACG
CTCGACGCCG GTGCGCGACG GCTGCTGCTC GTCGCGCGCG GCGTCGGTCT CGCGACGATG
GCGCCGCTCG TGCAGCGCGC GGCGGGGGCG GGCATCGCGC TGACGGTCGT GATGTCGGCG
CGCACGCCGG ACGACCTGAT GACCGCGGAA TTCGTGCGCG GCGCGCCGGC CGACGTGCAT
GCGGTGTTCG ACAGCGACGG CTCGTCGGCG GTCGCGAACG TGGACGCGCT GCTGCGCGCC
GCGATCGCGC GCGATCGGCC GGACGCGGTC TACACGTGCG GCTCGCAACG GTTGCTCGCG
CTGCTGCAGC GCGTGCTCGC CGACCATCCG TCGATGCGCG GCGAGGTCGC GCTCGAGCAG
CGGATGGCAT GCGGGATGGG CGTCTGCCTG TCGTGCGTGC GGATGTTCGA CGACGGCGCG
ACCCGCGCAT TCCGGCGCGT GTGCCGCGAG GGCCCGGTGT TCGCAATTCG CGACGTGGTG
ACGGAGGTGG AGGTGGAAGT TGGCTGA
 
Protein sequence
MDVIDGARAC AQPWAATVAT HACDVVAHRA VNRRYRYLRV RADAPLASVT QAGQFYQLVC 
PVSDLHRPFL PRPMSVYGVG PGAGEIEFLY NVTGEGTRAL AQLGVGARLS IVGPLGRPFT
LDAGARRLLL VARGVGLATM APLVQRAAGA GIALTVVMSA RTPDDLMTAE FVRGAPADVH
AVFDSDGSSA VANVDALLRA AIARDRPDAV YTCGSQRLLA LLQRVLADHP SMRGEVALEQ
RMACGMGVCL SCVRMFDDGA TRAFRRVCRE GPVFAIRDVV TEVEVEVG