| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5899 |
|---|
| Symbol | |
|---|
| ID | 4314804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 380472 |
|---|
| End bp | 381443 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638153739 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_777778 |
|---|
| Protein GI | 115360641 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.985129 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.042189 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAA ACGATCTGCT TGCCGCGCGC GTGATTGCGC GCGAGCGCGT CGCGTGCGAC
GTGATTTCGC TGCGGCTCGT CAGCGACGCG CCGGGTCTCG CGCTGCCGGC GTTCGAAGCC
GGCGCGCATA TCGACCTGCA TCTGCGCGAC GGGCTCACGC GCAAGTATTC GCTGTGCAAC
GATCCGGTCG AGCGCGGCGT GTACGAGATC GCGATCAAGC GCGAGCCGGC GTCGAGCGGC
GGCTCCGCGC ACGTGCACGA TGCGATCCGG GTAGGCGACG TGCTGCGGAT CGGCGCGCCG
CTGAATTACT TCCCGCTCGC GCCGGACGAC AGCCCGGCCG TGCTGCTCGC CGCCGGGATC
GGCGTGACGC CGTTGCTCGC GATGGCGCAT AGCCTGGTGC ACGCGGGGCG GTCGCTCGCG
TTCCACTACT TCGTGCGTTC GGCCGACGCG GCCGCGTACG GGGCGACGCT CGCGTCGCGG
CTCGCGGACG TCGCGACGGT GCACACGGGG CTGACGCCCG ACGCGACCCG CGACGCGATC
ACGACGATCG TCGGCGCGAT GGATTCGCGC TCGCATCTGT ATTTCTGCGG ACCGGCGCCG
TTCATGGCGG CCGTCGACGC GATCGCGCGC CCGGCGCTCG GCGATGCGCG GCTTCATCAC
GAGTATTTTT CCGCGCCAGC CGCGCAGCCT GCCGACGGCG AGGCCGACGC GTTCCGGATC
GAGCTCGCGC GCTCGCAGCG CGCGCTGCTC GTGCCGCCGG GGCAGTCGAT CACCGATGTG
CTGTACGAGC ACGGCATCGC GGTCGCCACG TCGTGCGAGG CGGGCGTGTG CGGCGCATGC
CGGACGACCG TGCTCGAGGG CACGCCCGAT CATCGGGACG CGTTCCTGAG TGCGGCGGAA
AAGGCCCGCA ACGATTGCAT GATGCCGTGC GTGTCGCGAT GCCGTGGCGA ACGGCTGGTG
CTGGATCTCT GA
|
|---|
| Protein sequence | MIENDLLAAR VIARERVACD VISLRLVSDA PGLALPAFEA GAHIDLHLRD GLTRKYSLCN
DPVERGVYEI AIKREPASSG GSAHVHDAIR VGDVLRIGAP LNYFPLAPDD SPAVLLAAGI
GVTPLLAMAH SLVHAGRSLA FHYFVRSADA AAYGATLASR LADVATVHTG LTPDATRDAI
TTIVGAMDSR SHLYFCGPAP FMAAVDAIAR PALGDARLHH EYFSAPAAQP ADGEADAFRI
ELARSQRALL VPPGQSITDV LYEHGIAVAT SCEAGVCGAC RTTVLEGTPD HRDAFLSAAE
KARNDCMMPC VSRCRGERLV LDL
|
|---|
| |