| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5898 |
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| Symbol | |
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| ID | 4314803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 378626 |
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| End bp | 379927 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153738 |
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| Product | major facilitator transporter |
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| Protein accession | YP_777777 |
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| Protein GI | 115360640 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0212784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACCC TGAATCGCAC GGCCGCAGCG CCAGTCGATG CCGAGCCGCG CGTGACGCGC
CGCACGGTCG TTGCGGCCGC ACTCGGCAAC GGACTCGAGT TCTTCGACTT CACCGTCTAC
AGTTTCTTCG CCGCCCTCAT CGGCAAGCTG TTCTTTCCCG CGTCAAGCGA CGTAGGCGCG
CTGATGCTGT CGCTCGCGAC GTTCGGTGTC GGGTTCGTCG CGCGGCCGCT CGGCAGCGTC
GCGATCGGCG CCTATGCGGA CCGTGCGGGA CGCAAGCCCG CGCTCGTGCT GACTGTCGCA
TTGATGGCGC TCGGCACCGG CATCATCGGT TTCGCGCCGA CCTATGCGCA GATCGGCATC
GCCGCGCCGC TGCTGATCGT TATCGGGCGT CTGTTGCAGG GCTTTTCGGC CGGCGGCGAA
GTCGGCGCCG CGACGACACT GCTGATGGAG TCGGGCGACG CCGGCAGGCG CGGCGAGCGG
GTGAGCTGGC AGATGGCCAG CCAGGGCGGC GCGACGCTGG TCGGCGCGTT CGTCGCGCTG
ACGCTGTCGC GCGCGCTGCC GCCCGAAGCA CTGCACGCGT GGGGGTGGCG CGTACCGTTC
GTGCTCGGTC TGCTGATCGG CCCGGTCGGC TTTTACCTGC GGCGTCACCT CGACGATACG
CTGCCGCACC CGGCGGCCGG CGCACCGCGC GAGCGTGCGC GCATTCCATG GCGGCAGGTC
GCAGCCGGCA CGCTGCTCGT GATCGGCGGC ACGTCGACCA CCTATACCAT CGTGTTTTTC
CTGCCATCGT TCCTGACGCT GACCGTCGGC ATGCCGGCAT CAGTGTCGCT GCTGTCGGGC
TGCGCGGCCG GCGCCGTGCT GCTGATCGGT TCGCCTTTCG CGGGACGGCT CGCGGATCGC
GTGCGTCATC GCAAGCGGCT GGTGAGCATG ACGTGCGTCG CGTCGGCCGT GCTCGTGCTG
CCGGCGTTTT ACGCAATGAA CAAGTGGCCG TCGGTTGTCA CCGCGGTCGC AGTCGTGATC
GTGCTGATCG GCTTGATGAC GCTGTCGAGT CCCGCCGGCT TCGTGATGAT CCTTGATGCG
CTCCGGCCCG AAGTGCGTGC GATGTCGCTC GGGACGATCT ATGCGCTCGG TGTGACGATT
TTCGGCGGGT TCGCGCAATT GATCGTCGGC GCGATGTGGC GCGCGACCGG CAGTTTCTAT
GCGCCTGCCT GGTATGTGCT GGCATGCAGT GCAGCGAGTC TCGTCGGTTT GATCTTGTTT
CGGGAGAGCA GGGGCGTGGA TACCATGCCG CCGGCAAATT GA
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| Protein sequence | MHTLNRTAAA PVDAEPRVTR RTVVAAALGN GLEFFDFTVY SFFAALIGKL FFPASSDVGA
LMLSLATFGV GFVARPLGSV AIGAYADRAG RKPALVLTVA LMALGTGIIG FAPTYAQIGI
AAPLLIVIGR LLQGFSAGGE VGAATTLLME SGDAGRRGER VSWQMASQGG ATLVGAFVAL
TLSRALPPEA LHAWGWRVPF VLGLLIGPVG FYLRRHLDDT LPHPAAGAPR ERARIPWRQV
AAGTLLVIGG TSTTYTIVFF LPSFLTLTVG MPASVSLLSG CAAGAVLLIG SPFAGRLADR
VRHRKRLVSM TCVASAVLVL PAFYAMNKWP SVVTAVAVVI VLIGLMTLSS PAGFVMILDA
LRPEVRAMSL GTIYALGVTI FGGFAQLIVG AMWRATGSFY APAWYVLACS AASLVGLILF
RESRGVDTMP PAN
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