Gene Bamb_5886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5886 
Symbol 
ID4314792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp367059 
End bp367877 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content65% 
IMG OID638153727 
Producthypothetical protein 
Protein accessionYP_777766 
Protein GI115360629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.174458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA CAGCAGTGCA AGGCTATAAC GCCGGCTATC TGAACGGCAT CGACGATGTC 
GGCGGCATCG GCGGCACGAA CGAATCGCAG CTCGCACAAC TGCTCGAGTT GCTCATCGAA
GAAATCAAGC AGATTCTCGA TCCCTCCAGC CAGAATTCAG GCGATGCCGG TGGTGTGGGC
GGCATCGGCG GCGGTACGCC TTCGTACTCC GCGCCGCCCG CCTATGCCGG CGGTGGCGGC
GCCGCACCCG CTGGCGTGAG TGGCGGCGGT GGCGGCCAGG GCGGTGGCGG CGCGTCGCCG
GGAATAGGCG GCGGTGGAAG CGGTGGCGGT GGCGGTGGCG GCGGCAACAC GCTGCCCAAC
GTATCGGGCG GCGACGCCGC GCACGCCATC GCACAGGACC TCAAATCGCG CTACGGCCTG
ACCGACGCGC AGGTAGCCGG CGTGCTCGGT AACCTGCAGC AGGAAAGCGG GCTGAAAGGC
AACGTCAATC AAGGCGGAGC GACAGGCGCG CCCTCCGGCA ACTTCGCGGA CGACAACGCC
AACGGTTGGG GGCTTGCGCA ATGGGGCGGC ACACGCAAAC AAGGCGAAAT CAACTATGCG
AAGGAGCACG GGCTCGACCC GGGCAGCCTC GAAGCCAACA TCGGCTTCAT GAATCAGGAA
CTCGACACGA CGTACAGCAA GACGATCACG GACATCAAGC AGACGACGAC GGCGGAACAA
GCGGCACTGG TCTGGGATAA GGACTACGAA CAGGCCACCG ATCCGCAAAT GGAAAACCGC
AACAAGTACG CCGAGCAATT CCTCGCGCAA GGTCTCTGA
 
Protein sequence
MSTTAVQGYN AGYLNGIDDV GGIGGTNESQ LAQLLELLIE EIKQILDPSS QNSGDAGGVG 
GIGGGTPSYS APPAYAGGGG AAPAGVSGGG GGQGGGGASP GIGGGGSGGG GGGGGNTLPN
VSGGDAAHAI AQDLKSRYGL TDAQVAGVLG NLQQESGLKG NVNQGGATGA PSGNFADDNA
NGWGLAQWGG TRKQGEINYA KEHGLDPGSL EANIGFMNQE LDTTYSKTIT DIKQTTTAEQ
AALVWDKDYE QATDPQMENR NKYAEQFLAQ GL