Gene Bamb_5881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5881 
Symbol 
ID4314787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp359174 
End bp360412 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content72% 
IMG OID638153722 
Producthypothetical protein 
Protein accessionYP_777761 
Protein GI115360624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.746797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGG CCATTCGGGC GCTGCTGTGC GGCGTCTGGT TCGCCTTCAC GGTCGCGCAC 
GCTTCCGATC AGCAAGTAAT CGTCGACGGC GGGCAGCGCC TGGGCGGCGT CGTGCGCACG
GGCGGCCACG ACGTTCCGTT GCTGCGCGCG CTCGAGCAGA TCATGCCGAC GAGTTACAGC
ATCAATGTGC CGAACGCGGG CGCATGGGCC GACGCGTCCG TGAGCTGGCG CGCCGGCTCG
TCGGTCGTGC ACGCGCTCGG CGAGGTGCTG TCGGTCGATC CTGCGCTGCA GGCGCGCGTC
GATACGGATA TGCGTTTGCT CACGGTGACC GCGCATGCGC GGCGCGCAAA CGTTGACGCG
CCGCAGCCTT CCTCGCCGGC AGCCGGCGCG TCGTCGCGCA TGAACAGTGC CGCCACGAAT
GCGTCTTCCA CCTTGCCCAC GGGCGCGGCG GCGATGGCTC CCGCGGCGGG ACCTGCCATT
GCACCGGCGC AGACCCTGGT GCAGGCGCGC GTTTCGACGT GGATACCCGC AACACCGGCA
TCGGCTCGCA CACCGGCGGC AGCACTGGCG GTCCCGCCCG TGCCGGCATC GGCACCCGCG
CCCGCGCCCG CTCCGGTGAT GTCGTCCGCA CCGGCGGCCG GGCCGGCCAT GCCGGCACCC
GCACCCGCAC CAGCACCAGC ACCAGCACCA GCACCAGCAC CAGCACCCGC GCCCGCGCCC
GCGCCCGCTC TGGCGATGTC GCCCGCACCC GCGCCCGCTC CGGCGATGTC GCCCGCACCG
GCAGCCGGGC CGGCCAAGCC GGCATCGGTA CCGGCGCTTG TTTCAGCACC GCCGCGAGCG
CAGGTACCCG CGCCCGCAAA GCGCGACGCC ATAGAGCCCC CGTTGCTCGC CGCCACGCAA
CCGGCGTCCG GCCCGGACTC CCCGGCGCCA TCGTCGGCGC CAGCCGCGAC TCCGGCGTTC
GTACCCGCGG CGGCGCCCGA GCGCACGGAG TGGCAGATGC GCCTGTCGGA CGGCTCCGTG
CGCAATGCGC TCGCGCGCTG GGCGAGCGAA GCCGGCTGGC AATTCATCTG GGACGTGCCG
ACCGATTTTC AGGTCGACGC GACGGCCACG ATACACGGCA CGCTCGCCGA AGCGCTGCGT
CAGGTGACCA ATGCGCTCGC CGGCTCGCAG GTGCCGATTC AGGTGGTCTT GTACCAGCGC
AACCACGTCA TGCGCGTCGT TCCCAAAGGA GCAAGTTGA
 
Protein sequence
MPPAIRALLC GVWFAFTVAH ASDQQVIVDG GQRLGGVVRT GGHDVPLLRA LEQIMPTSYS 
INVPNAGAWA DASVSWRAGS SVVHALGEVL SVDPALQARV DTDMRLLTVT AHARRANVDA
PQPSSPAAGA SSRMNSAATN ASSTLPTGAA AMAPAAGPAI APAQTLVQAR VSTWIPATPA
SARTPAAALA VPPVPASAPA PAPAPVMSSA PAAGPAMPAP APAPAPAPAP APAPAPAPAP
APALAMSPAP APAPAMSPAP AAGPAKPASV PALVSAPPRA QVPAPAKRDA IEPPLLAATQ
PASGPDSPAP SSAPAATPAF VPAAAPERTE WQMRLSDGSV RNALARWASE AGWQFIWDVP
TDFQVDATAT IHGTLAEALR QVTNALAGSQ VPIQVVLYQR NHVMRVVPKG AS