| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5879 |
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| Symbol | |
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| ID | 4314785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 356099 |
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| End bp | 357415 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638153720 |
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| Product | pilO; putative type IV pilus biosynthesis protein |
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| Protein accession | YP_777759 |
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| Protein GI | 115360622 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.87974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGC AAGTCATCCA GATCGGCCGG CAGCGGTTCA TATGCGGCCT TTTCTGGCAA
TCGCTGTCGC GCCGGCACGC GCTGCGCGCG GAGGCCGTGG AACTCGCCGC GCGCCTGAAT
TTCGATGCGA TGGTGCTGCG TATCGACCGC ACCTTCGCGG GCGCGGGTTT CGCGAGCACG
CGCGAGGGCG CGCAACTGGG CTTGCCGTCG CTCGGCGCGC TCGTGTCGAA GACGATCGCG
GTCGAAGGCG CGTTCTACGA CGGACGCCAG CAGCCGGCGC CCAACTGGCT CGGTGCGTTC
CATCTGCCCG ACGGGCGCTG GGCCTACTTC GCCGTGCGCG ACGGCGCATT CCTGCCGAAC
GGCGATCGGA TCGGTTCCAG CGAAGAAGTG TTCGAGCGGC TGCACAGCGA TTACAGCCTC
GGCGGCTGGA ACGTCGTCAT CGGCGATCCG CAGCTGGAAG TGCAGGGGTT CCACAACTTC
TACGCGCGGC GCATCGAGGA CATGATCCCG CGCCGGGGCG GCAAGCCGCA TTTGCCGCGC
TGGCTGAATC TGTCGCGTGT CTCGCGGCGC GCACCGCGGC GCGAGGTGCT GCTGGCCGCC
GTCGCGATCG TGGTGGCGGC CGCGGTTGTG GCCGGCATCG TCGCGTACCG GCGCCACCGT
ATGGAAGTCG AGCGGCAGCA GGCGTTCGAG CGGATGCGCG CGGAGCTCGC GCTGCATCCG
CCCAAGCCCG CGGCACCGCC CGAAGCCGTG CACCCGTGGG CCGGCGAGCC GCGGCCCGAT
GCGTTCGTTC GCGCGTGCGT CGATCACTTC ACGCACATCG CGCCGGGCGG CTGGGAACTC
GACGACTACG TTTGCCGCGC GTCGAACGTC AGCTACAGCT GGTCGCGGGA CGGATCGAAC
GTGGCGATGC TGATGGCGGC GGAGCCGCGC GCGACGATCG ACGGCAACGG CGAGCATGCG
AGCTACGTGG AGCCGCTGGC ATTGCCCGCG GGGGGAGACG AAGTGATCGA TGGCGTGCGC
GGCGTGCGCT TGCGCATGCT TTCCGCCTTC CAGTTGCTGG GCATCGGCCT GACGTTCACG
CTGCAGCCGG CAAGCGCGCC GCAGCGCAGC GTCGCTTCGC AAACGCTGGA CCGGCTGCAT
CCGGGCGGCG GCCCGCCGCC GGCGCCGAGC TGGCAGACCT GGCGCATGTC GGCGCAACTG
GGCGGCGTGC GGCCCGACAG CCTCATCAGG TATCTCGACG AGCCGGGCGT GCGCGTCGAG
ACGCTTTCAT ACAAATCCGG GCAGTGGACG CTCGACGGAG TGCTCTATGA GAAATGA
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| Protein sequence | MATQVIQIGR QRFICGLFWQ SLSRRHALRA EAVELAARLN FDAMVLRIDR TFAGAGFAST
REGAQLGLPS LGALVSKTIA VEGAFYDGRQ QPAPNWLGAF HLPDGRWAYF AVRDGAFLPN
GDRIGSSEEV FERLHSDYSL GGWNVVIGDP QLEVQGFHNF YARRIEDMIP RRGGKPHLPR
WLNLSRVSRR APRREVLLAA VAIVVAAAVV AGIVAYRRHR MEVERQQAFE RMRAELALHP
PKPAAPPEAV HPWAGEPRPD AFVRACVDHF THIAPGGWEL DDYVCRASNV SYSWSRDGSN
VAMLMAAEPR ATIDGNGEHA SYVEPLALPA GGDEVIDGVR GVRLRMLSAF QLLGIGLTFT
LQPASAPQRS VASQTLDRLH PGGGPPPAPS WQTWRMSAQL GGVRPDSLIR YLDEPGVRVE
TLSYKSGQWT LDGVLYEK
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