| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5877 |
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| Symbol | |
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| ID | 4314783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 353724 |
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| End bp | 355244 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153718 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_777757 |
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| Protein GI | 115360620 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCGCC CGCTTTCCGA CAGCGGCGAG TTCGCCGCGA GCGAGGAGGA GCGCAAGTTT
CTCTGTCTGC TCGACGACGG CACGCTGCTC GTTGCCGAAG GGCACGAAAT GAATCCGTTC
GTGCTGTCGT ATTGCGCGAG GCTCGAACGG CTCAATTGCC ACTACACGAC GCGGCTCGTG
ACACTCGATG CGATCAGACG CAGCTATCAG GGCCCGCGTC GCGACGGCAG TGCCGAGCGC
ATCGATCACA CGCGGATGCA GGTCCTCGCG AAGAACCTGA TCGCGCGGGC GTGCGACGAG
CGTGCGTCGG ATATCCATAT CCGTGTGAAC CGCTTCAGCA CGGAGATTCT TTTTCGCATC
CACAACGAAC TCGTGCGCAT TTCGGAGCAG ACGCGCGAGT ACGGCGAGCG GCTGCTCGCC
ACGCTGTATG CGGCGATGTC GAGCGTATCG GACAACACCT ACAAGCCGAA CGAACGCCAG
GACGCGGCCA TCGGCGATCG CGACAAGCTG CCGGACCGGC TGTTCGGCGT GCGGATCGCG
ACGGCGCCCA CGAGCGTCGG CAGCGTCATG GTGCTGCGGC TGCTCTACAA CGATGCGGGC
GAGGCGACGG CCCTGACCGA GCTCGGCTTC ACGGTGGCGC AGGCGAACGC GTTCGAGCTG
CTCGCGCAGC AGCCGCACGG CATGAACATC ATCAGCGGCC CGACCGGCTC GGGCAAATCC
ACGACGTTGC AGCGCGTGCT GACGAAGCAA CTGCGCGAGA TGGCCGGCTC GATCCACGTC
ATCACCGTGG AAGACCCGGT GGAGTACCCG ATCGAGGGCG CCGTGCAGAC GCCCGTCGTC
AACGCGCCGA CGGAAGAGGC GCGCTCGCTC GCGTTCGCCG CCGCGATCGC GAATGCGATG
CGGCTCGATC CCGATACGAT CATGATCGGC GAGGTGCGCG ACCGCGCATC GGCGCAAAGC
GCGTTGCGCG CCGCGATGAC GGGCCATCAG GTCTGGACGA CGGTGCATGC GAACGGCGCG
CTCGCGATCG TGGACCGTCT CGTCGATCTC GGCTTGCCGA TCGCGATGGT GACGGACGAA
TCGCTCGTCA CGGGGCTCAT CAGCCAGCGG CTCGCCAAGC TGCTGTGTCC GCACTGCTCG
CGCCCGCTGG CCGAGGCGAT GGCGCAGCTC GACATGGGGC TCGTCGCGCG CGTGAAGCGG
GCCGTCGGCG CGCGGTTCGA CGCGGTGCGC GTGGCCGGGC CCGGTTGCCC GCATTGCAAG
AACGGCACGG TCGGCCGGAC GGTTGTGGCC GAGGTCGTGC GTACCGACGC GACGTTTTGC
GAATTGCTGC GCGCCGGGCG CAAGCCCGAT GCACAGGCGT ACTGGCTCAG CGAGCTCGCG
GGGCAGACGG TCGCGCAGCA CGCGCTCGAA AAAGTGGCGG CGGGCCTCAT CGATCCGCGC
ATGGCGGAGC GCGTGGTCGG CCCGTTCATG CAAGGCAGCG GGGGGCGGCC GCAGCCGCTC
GGAAGCGGCT ATGGCACTTG A
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| Protein sequence | MARPLSDSGE FAASEEERKF LCLLDDGTLL VAEGHEMNPF VLSYCARLER LNCHYTTRLV
TLDAIRRSYQ GPRRDGSAER IDHTRMQVLA KNLIARACDE RASDIHIRVN RFSTEILFRI
HNELVRISEQ TREYGERLLA TLYAAMSSVS DNTYKPNERQ DAAIGDRDKL PDRLFGVRIA
TAPTSVGSVM VLRLLYNDAG EATALTELGF TVAQANAFEL LAQQPHGMNI ISGPTGSGKS
TTLQRVLTKQ LREMAGSIHV ITVEDPVEYP IEGAVQTPVV NAPTEEARSL AFAAAIANAM
RLDPDTIMIG EVRDRASAQS ALRAAMTGHQ VWTTVHANGA LAIVDRLVDL GLPIAMVTDE
SLVTGLISQR LAKLLCPHCS RPLAEAMAQL DMGLVARVKR AVGARFDAVR VAGPGCPHCK
NGTVGRTVVA EVVRTDATFC ELLRAGRKPD AQAYWLSELA GQTVAQHALE KVAAGLIDPR
MAERVVGPFM QGSGGRPQPL GSGYGT
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