| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5854 |
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| Symbol | |
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| ID | 4314760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 330974 |
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| End bp | 331765 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638153695 |
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| Product | YscJ/HrcJ family type III secretion apparatus lipoprotein |
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| Protein accession | YP_777734 |
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| Protein GI | 115360597 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGA ACCTCGTGCC TACAAGGCCG CGCGCTTCAT GGCGGCTCGT CGCGGCGGCG
GTGCTCGTGC TGTCGCTCGC GGCCTGCAAG CAGGATCTGT ACGGCCAGTT GAGCGAAAGC
GACTGCAACG AGATGGTCGC CGCTTTGCTG AGTTCGGGCG TCGATGCGCA AAAGAGCACG
CCGGACGGCG GCAAGACCTG GTCGGTCAGC GTCGACGAAA AGCAGATCGT GCATGCCGTG
GAAGTGCTGC GCGCACGCGG TATTCCGCGC AAGAAGTTCG ACGACCTCGG CTCGCTCTTC
AAGAAGGACG GGCTCGTATC CACGCCGACC GAGGAGCGCG TGCGCTTCAT CTACGGGCTG
TCGCAGGAGC TCGACGATAC CTTGTCGAAG ATCGACGGCG TGGTCGTGGC GCGCGTGCAG
ATCGTGCTGC CGAACAACGA TCCGCTGGCG CAGTCGGTCA AGCCGTCGTC CGCGTCGGTC
TTCATCAAGT ACCGGCCCGA TGCGAATCTC GAGCGGATGA CCCCCGCGAT CAAGAACCTC
GTCGTGCACA GCATAGAGGG GCTGACCTAC GATCAGGTCA GCGTGACGAG CGTGCCGGCC
GATGCACCCG ATGTGCCTGC CCGCCCGCGG CGACAGGGCG GGTGGATCGT TTATGCGGGC
GGCGCGCTCG GCATGCTGTT GTTGATGATC GCCGGCGGCT TTGCGCTCTT GCGCGGCACC
CTGCTCAAGG GCGGCGGCCT GGCGGGCCTG CTCGCGCGCC GGACAGGGCG CGCGGCGAAA
GCGCCGGCAT GA
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| Protein sequence | MKSNLVPTRP RASWRLVAAA VLVLSLAACK QDLYGQLSES DCNEMVAALL SSGVDAQKST
PDGGKTWSVS VDEKQIVHAV EVLRARGIPR KKFDDLGSLF KKDGLVSTPT EERVRFIYGL
SQELDDTLSK IDGVVVARVQ IVLPNNDPLA QSVKPSSASV FIKYRPDANL ERMTPAIKNL
VVHSIEGLTY DQVSVTSVPA DAPDVPARPR RQGGWIVYAG GALGMLLLMI AGGFALLRGT
LLKGGGLAGL LARRTGRAAK APA
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