| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5842 |
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| Symbol | |
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| ID | 4314748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 317152 |
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| End bp | 319377 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638153683 |
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| Product | catalase/peroxidase HPI |
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| Protein accession | YP_777722 |
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| Protein GI | 115360585 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAA AACGTGTCGG AAAATCGGTC GTGGCCGCGC TCGCCATCAT CGCGATGAGT
GCCGGCACCG TTGCCGCGTG GGCCGACGGT GCGCCGCGCA CGAATGACTT CTGGTGGCCG
GAGCGGCTCG ATCTTTCGCC GCTGCGTCAG CACGACGTCG AGTCGAATCC GTACGGAAAG
GATTTCGATT ATGCGCAGGC ATTCAACAAG CTCGATATCG AGGCCGTGAA GAAGGATATC
CGCGCGACCC TGACGACGTC GCAGGACTGG TGGCCGGCAG ACTACGGCAA CTATGGACCG
TTCTTCATCC GGATGGCGTG GCACGGCGCG GGCACCTATC GCACGTACGA TGGCCGTGGC
GGCGCCGGCG GCGCACAGCA GCGATTCGAG CCGCTGAACA GCTGGCCCGA TAACGCCAAT
CTCGACAAGG CGCGCCGTTT GTTGTGGCCG ATCAAGAAGA AATATGGCGA GAATATTTCG
TGGGGCGATT TGATGGTCCT CACCGGCAAT GTCGCGCTTG AATCCATGGG TTTTCAAACC
TTCGGCTTTG GCGGCGGCCG GGAAGACGAC TGGCAATCGG ATCTGGTTTA CTGGGGCGCC
GGCACGAAAT TCATGTCGAA TAACCGCGAC AAGAACGGCA AGCTCGAGAA GCCGCTGGCG
GCCACCCAGA TGGGGCTGAT CTACGTGAAC CCGGAAGGTC CGAACGGCAA CCCCGATCCC
GTCGCCGCGG CAAAGGACAT TCGCGACGCG TTCGGCCGCA TGGCGATGAA TGACGAGGAG
ACCCTCGCGC TGATCGCGGG CGGTCATACC TTCGGCAAGG CCCATGGCGC GGCGTCGCCC
GACAAATGCG TCGGCGCGGC ACCGGCGGGC GCGGGCGTCG AAGCGCAAGG CCTGGGCTGG
GCGAACAAGT GCGGCACCGG GAAGGGCGCC GACACGATCA CGAGCGGCCT TGAAGGCGCA
TGGTCGGTCG ACCCCGTTCA CTTCACGATG CAGTATCTCG ACAATCTGCT CGAACACGAT
TGGGTGCTGA CGAAGAGCCC GGCAGGCGCT CATCAGTGGA TGCCGAAGGA CGCGCAGGAC
ATCGTGCCGG ACGCACACGA TCCGTCGAAG CGACATCCGC TGATGATGTT TACGACCGAT
ATCGCGTTGA AGGTCGATCC CGCGTACAGC GCGATCGCCA AGCGCTTTCA CGCGCATCCC
GAGGAATTCA AGCTGGCGTT CGCCAAGGCG TGGTTCAAGC TGACGCACCG GGATCTGGGC
CCGAAGGCGC GCTATCTGGG CAAGGATGTG CCCAAGGTCG ATCTGATCTG GCAGGATCCG
CTGCCCGTTG CCGGCTACCA GATGATCGGC GACGCCGATA TTGCGGAGCT GAAGCGCAGG
ATCCTCGCAT CGGGGGTGCC GAAGGCGGAA CTGATCAAGA CCGCGTGGGC GTCCGCGGCC
TCGTTCCGTG CCACCGACTA CCGAGGCGGC GCGAATGGCG CGCGCATTCG CCTCGCGCCG
GAAAACGACT GGGCGGTGAA TGACCCGGCG AGCCTGTCGA AAGTGCTGAA GTCGCTGGAA
GGCATTCAGT CCGGCTTCAA CAGGAACAGA ACGGATGGCA AGCAGGTGTC GCTGGCCGAC
CTGATCGTGC TGGGCGGCAG CGCGGCCGTC GAGGATGCGG CCCGCAAGGC CGGCTACGAC
GTCAAGGTGC CATTCTCGCC GGGACGCGTC GATGCGACGC AGGCGCAGAC CGATGTCGCT
TCGTTCGCCG TTCTCGAGCC GACCGCCGAC GGGTTCCGCA ACTACTATCA GAAAAGCAAT
GAGCGGTCGC CGGCCGAATT GATGGTCGAC CGCGCGAGCA AGCTGGATCT CACCGTTCCG
GAGATGACCG TTCTCGTGGG CGGGCTGCGT GCGCTGGACG CCAATGCGGG CCATTCAAGG
CTCGGTGTCC TGACCAATCG TCCCGGCACG CTGAGCAACG ACTTCTTCGT GAATCTGCTC
GACATGTCGA CCCAATGGAC GAAGTCCTCC AGTGCCGACG GGACTTACGA AGGGCGTGAC
CGCAAGACGG GCGCGCTCAA GTGGACGGCA AGCCCGGTCG ATCTGGTGTT CGGTTCCAGT
TCGGAGCTGC GGGCCGTTGC CGAAGTCTAT GCGTCGGACG ATGCGCACGA GAAGTTCGTA
CGCGACTTTG TCCAAGCGTG GACGAAAGTG ATGAACCTCG ATCGCTTCGA TCTGAAGCGC
AGCTGA
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| Protein sequence | MQKKRVGKSV VAALAIIAMS AGTVAAWADG APRTNDFWWP ERLDLSPLRQ HDVESNPYGK
DFDYAQAFNK LDIEAVKKDI RATLTTSQDW WPADYGNYGP FFIRMAWHGA GTYRTYDGRG
GAGGAQQRFE PLNSWPDNAN LDKARRLLWP IKKKYGENIS WGDLMVLTGN VALESMGFQT
FGFGGGREDD WQSDLVYWGA GTKFMSNNRD KNGKLEKPLA ATQMGLIYVN PEGPNGNPDP
VAAAKDIRDA FGRMAMNDEE TLALIAGGHT FGKAHGAASP DKCVGAAPAG AGVEAQGLGW
ANKCGTGKGA DTITSGLEGA WSVDPVHFTM QYLDNLLEHD WVLTKSPAGA HQWMPKDAQD
IVPDAHDPSK RHPLMMFTTD IALKVDPAYS AIAKRFHAHP EEFKLAFAKA WFKLTHRDLG
PKARYLGKDV PKVDLIWQDP LPVAGYQMIG DADIAELKRR ILASGVPKAE LIKTAWASAA
SFRATDYRGG ANGARIRLAP ENDWAVNDPA SLSKVLKSLE GIQSGFNRNR TDGKQVSLAD
LIVLGGSAAV EDAARKAGYD VKVPFSPGRV DATQAQTDVA SFAVLEPTAD GFRNYYQKSN
ERSPAELMVD RASKLDLTVP EMTVLVGGLR ALDANAGHSR LGVLTNRPGT LSNDFFVNLL
DMSTQWTKSS SADGTYEGRD RKTGALKWTA SPVDLVFGSS SELRAVAEVY ASDDAHEKFV
RDFVQAWTKV MNLDRFDLKR S
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