| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5838 |
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| Symbol | |
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| ID | 4314744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 313862 |
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| End bp | 314608 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153679 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_777718 |
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| Protein GI | 115360581 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.800296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCG ATTTCGATTT CCTCCTCGGC ACGCTGGGCC AGCTGCTCGC GGCCGTGCCG
ACCACGCTGG GCCTGTTCTT CGCGTCGCTC GTGCTCGGCG GCCTGCTGTC GCTCGTGATC
GTCACGATGC GCGTGTCGCC GCACTGGCTG CCGAACCGCT TCGCGCGTGC GTACATCCTC
GTGTTTCGCG GCTCGCCGCT GCTGATCCAG ATGTTCCTCG TGTATTACGG GCTCGGCCAG
TTCGGCGTGA TCCGCGAAAG CTTCATCTGG CCGCTGCTGC GCGAGCCGTA TGTATGCGCG
GTGCTGTCGC TCGCGCTGTG CACGGCAGGC TACACGGCCG AGATCTTGCG TGGCGGGCTG
ATGGCCGTGC CGGTCGGGCA GATCGAGGCT GGTTATTCGA TCGGCCTGTC GGGCTTCGCG
CTGCTGCGCC GCGTGATCGG CCCGATCGCA TTGCGCCAGT GCCTGCCCGC GTATTCGACC
GAAGCCGTGC TGCTGGTCAA GTCGACCGCG CTCGCCAGCC TCGTGACCGT GTGGGAGGTG
ACGGGCGTCG CGCAGCAGAT CATCCAGCAG ACCTACCGGA CGACCGAGGT GTTCGTGTGC
GCGGCGCTGA TCTACCTGGG CCTGAACTTC ATCGTCGTGC GCCTGCTCGG CGCGCTCGAA
TGGCGACTCT CCGGCCACCT GCGTGCGCCG AAGCCATCCG GTGCGTCCGC CGCGGCGGCA
CGCAATCCCC GGCGCGTTGC GTCCTGA
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| Protein sequence | MSFDFDFLLG TLGQLLAAVP TTLGLFFASL VLGGLLSLVI VTMRVSPHWL PNRFARAYIL
VFRGSPLLIQ MFLVYYGLGQ FGVIRESFIW PLLREPYVCA VLSLALCTAG YTAEILRGGL
MAVPVGQIEA GYSIGLSGFA LLRRVIGPIA LRQCLPAYST EAVLLVKSTA LASLVTVWEV
TGVAQQIIQQ TYRTTEVFVC AALIYLGLNF IVVRLLGALE WRLSGHLRAP KPSGASAAAA
RNPRRVAS
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