| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5833 |
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| Symbol | |
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| ID | 4314739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 306054 |
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| End bp | 307103 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638153674 |
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| Product | patatin |
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| Protein accession | YP_777713 |
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| Protein GI | 115360576 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.200172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.404801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCA CGCATACAAG ACGTCACCGC GATGTCCCGC GCAAACCGGT CGCGCTGGCG
TTGCAGGGCG GCGGGATGCA CGGCGCCTTC ACGTGGGGCG TGCTCGACCG GCTGATCGAA
GACGGCAGGC TCGACATCGA GGGCGTCAGC GCCACCAGCG CCGGCGCGAT GAACGCCACG
GTACTCGCGT ACGGGCTGCT GCAGGGCGGC GAGGACGGTG CGCGCCAAGC GCTGCACGAC
TTCTGGGAGG CCGTCGCGAA ATCGGCGGAG CACTACAACC CGCTGCGCTG GGCGCCGTGG
CTGAAGGGCA CGCACAGCTT CGGGCTCGAT CATTCGCCGA TTTATGCGTT CGCCGACATG
ATGCTGCGCA TTTTCTCGCC CTATCAGTTC AATCCGAACA ACCTGAATCC GCTGCGCGAG
GTGCTCGAGC GCCGGGTCGA CTTCGACGCG CTGCGCAAGC ACTGTCCGAT CCGGTTGTAC
CTGAGCGCCA CCAACGTGGA GACCGGGAAG ATCCGCATCT TCACGGGCGA GGATGTCAGT
GCCGACGCGG TGCTTGCGTC GGCATGCGTG CCGACCCTGT TCCAGGCGGT GTCGATCGAT
GGCGAGTACT ACTGGGACGG CGGCTACATG GGCAATCCGG CCATCTATCC GCTGATCTAC
AACTGCGCGA CGCGCGACGT CGTGATCGTG CACATCAATC CGCTCGTGCG CCGTGGTGTA
CCCATCACGG CCGCGGAGAT TCTCAACCGT ATCAGCGAGA TCAGTTTCAA TTCGTCGCTG
ATGCGCGAGA TGCGCGCCAT CGCGTTCGTC ACCGACCTGA TCCGGGACGG CACGGTCAAG
CGCGGCGACA TGAAGGAAAT GCTGATCCAT TCGATTCGCG CGGACGACGC GCTGAGCGCA
TTGAGCGTAT CGAGCAAGTA CAACGCGGAC TGGGGATTCC TGAGCGAGCT GCGTGACCAC
GGACGGCGCG AAGCGGACGC GTGGCTCGCG CATCATTACG GCAACATCGG GCAGCGGTCC
AGCATCGACA TTCGCAGGGA ATTTTTCTGA
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| Protein sequence | MTITHTRRHR DVPRKPVALA LQGGGMHGAF TWGVLDRLIE DGRLDIEGVS ATSAGAMNAT
VLAYGLLQGG EDGARQALHD FWEAVAKSAE HYNPLRWAPW LKGTHSFGLD HSPIYAFADM
MLRIFSPYQF NPNNLNPLRE VLERRVDFDA LRKHCPIRLY LSATNVETGK IRIFTGEDVS
ADAVLASACV PTLFQAVSID GEYYWDGGYM GNPAIYPLIY NCATRDVVIV HINPLVRRGV
PITAAEILNR ISEISFNSSL MREMRAIAFV TDLIRDGTVK RGDMKEMLIH SIRADDALSA
LSVSSKYNAD WGFLSELRDH GRREADAWLA HHYGNIGQRS SIDIRREFF
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