Gene Bamb_5826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5826 
Symbol 
ID4314732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp296467 
End bp299313 
Gene Length2847 bp 
Protein Length948 aa 
Translation table11 
GC content72% 
IMG OID638153667 
Producttranscriptional regulator 
Protein accessionYP_777706 
Protein GI115360569 
COG category[R] General function prediction only 
COG ID[COG3903] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGA TCGGGGCTTT ATCGGTGGAT TTCGAGCAGC GGGACATTCG CCGTCACGGC 
GCGGCGCTGC GTATTGGCGC GCGCGCGCTC GACATACTTG AAGTACTGCA TCGCGCCAAC
GGTTCCGTCG TGTCGAAGGA CGACATCATG GATGCCGTCT GGCCCGGCCT GATCGTCGAG
GAGAACCGGC TGCAGGTGCA TGTCGCGGCG TTGCGCAAGG CGCTCGGTGC GAGCCGCGAC
CTGATCAAGA CCGTCCCGGG CCGCGGCTAC CTGCTGGTCG CGAATCCGCC GCTCCTGCAC
GCGGTGGCGC CGCACCCGGC CGCCGCGGCG CCAGGCGCCG AAGCGACCCA TCACGCCCCG
CTCGTCGGCC GCCGCGCCGA GCTCGAGCAG ATCGTCGACA TGATCGACCG TGCGCCGGTC
GTCACGCTCG TCGGCGCGGG CGGCATCGGC AAGACGAGTC TGGCCGACCG CGTCGCGCAC
ACGTGGCGCG GCCGGGTCGG CGAGCGCGCG CTGTTCGTGG AGCTGGCGCG AGCCACGACG
CGCGACGACG TGCTGCTCGC GATTGCCGCG GAACTGGGGC TCGACATGCA TGGCGTGCCG
GCCGTCGACC GGCTCGGCGA CGCATTCGCC GTGTCGCGCA GCCTGCTCGT GCTCGACAAC
GCGGAGCACG TCGTCGATCT GGTGGCCGAC CTCGTCGAGT CGCTGACGGC GCGCGCCGCG
CCGCTGCGGG TGCTCGTGAC GAGCCGCGAA CCGCTTCATA TCTCGGTCGA AACCGTGTTC
CGCGTGAGTC CGCTGGCGGT GCCCGACGGC GCCGCAACGG TCGACGAGAT CGCGCGCCAT
TCGGCGGTCG AGCTGTTTCT GGCGCGGGTT CGCGCGGCCA CGCCCGAGTG CGTGATCGAC
GCGGCCGGTG TCCGGCTGAT CGGCGATATC TGCCGGCGGC TCGACGGGCT TCCCCTCGCG
ATCGAACTGG CTGCCGCGCG CGTCGCGACG CTCGGGCTGG AGGTCGTTGC GTCGCGTCTC
GACGACCGGC TGAACCTGCT CACCGGCGGC CTGCGCTCCG CGTTGCCGCG CCATCAGACG
CTGCGCGCGA CGTTCGACTG GAGCTACGTG CTGCTGGATG CGGCCGCGCG TGCGCTGTTT
CGCCGGATGG CGTGCTTCGT CGGCCCGTTC ACGTTCGATG CGGCGCGCGA AGTCGCGATG
GATCCCGGCA TGTCGCCCGC CGATATGATC GCCGTGCTCG GCGAGCTGAT CGCCAAGTCG
CTGGTGACCG TCGAATTCAA CGGCGCGCAG GCGCGCTACC GATTGACCGA ATCGACGCGC
GCGTATGCGC TGGAGAAGCT GCATAACGAG GGCGAGTTCG AACGCATCGC CGAGCGTCAT
GCGCGCCATG AACACGCGCA GGCGCAAGCC CGGCTGCCGG CTCCCGTGCA AGCCGTGCGC
GAACCCGCGG CGGTCGAGCC GCCGGTCGCG GAAGCCGACG CGCTGGCGCT CGCATTGCGG
GAGCCGGCGC GCATGCGCGA CTGTTCGATC CCGGCGAGGC GCGCGCTCGA CGCGATCGAG
GCCGGCGCGC TCGGGCCCGT CGACGCGTCG AGCGAGATGC GGCTGCGCGC GGCCTATGCG
TCGGCGCTGC TATATACGGA CGGCGATACG CAGACGGCTG CCGCGATGTG GGAGCGCACG
CTCGGCCTTG CCGGGCGCGT CGGTGACGAC GCATTCGACG CCAGCGCGAT GGTCGGGCTC
TGGAACGCGA CGCTGTCGCA CGGCGACATT CACGAATCGC TGCGCTACGC GATGCGCTTC
GAGCGGGCCG CCGAGCGGCG CGGTGACCGG CCGCAACGGC TGCTGGCGAA CGCGATGGTC
GCGACGTCGC TGCATTACTT CGGCGAGCAT GCACAGGCGC GCGAGCGGCT GGAGGCGGCC
ACGGCCGAGC TGGCCGTGGC CGGCGAACCG CCTTGCGCGG CAGCGGCGCT CGGCATTGAC
GTCGCCACGC TTGGGCGGAC GGTGCTGGCG CGGCTCGTCT GGATGCAGGG CGACGTGGAC
CATGCGATGC GGCTCGCCGC GCAGGCGGTC GAATCCGCGC GCCGCGGCGG GTCGGCGCTG
GCGTTGTGCG TCGTGCTCGG CGCGGCGGCC GTGCCGATCG CGTTGCGCCA TGGCGATCAC
GACATCATCT CCGACTATCT CGCGACGCTG CGCTCGGCCG CCGAGGCGAA CGGCTTCGAT
ATCTGGCTCG ACCATGCGGA ATGTCTCGCG GGACAGTTCG ACATGCAGGC CGGCCATCCG
GGCGCCGGGC TGGCGCGGCT CGAACCCGCG CTGCGACGCA TCGAGGCGAG CGGCTTCCGG
CGCCTGCTCG CGCCGCTGGT GGTCGCGTAT GCGGAAGGGC TCACGCGCAC GGGCCGCGCG
GCCGAGGCCC GCGTGAAGCT CGACGCGACG CTCGCGTGCT GCCGCGCGCA AGGCGAGCAT
CTGTTCGTGC CCGAGCTGCT GCGTGCCCGA GGTCTGGCGA TGCTCGAACA GGCCCGCACC
GCCGACGCGG AGCGCGCGAT CGCCTGCGAA GCGGACGGGC ACCGGCATCT GCTGATGGCG
ATCCATGCGG CGAACGGGCA GGGCGCGGCG ATGTGGGCGC TGCGCGGCAC GCTTGATCTC
GCCGATCATC TGATCGAGCG CGGGCGTATC GGGCAGGCGT CGTCGCTGGT GGCGAACCTG
TCCGGGCATT TCGACCCGCA ATCGCGCGCG GTCGACGTGC GGCGCCTCGC GCGGGTGCAG
AGCTTCATCC GCTCGGAGAC GGCGCGGCCG ACCGGTCCTG CGCACCTCCG CCACGAGACC
CTCGATGCGA TGCAATCGGC CGCGTGA
 
Protein sequence
MIQIGALSVD FEQRDIRRHG AALRIGARAL DILEVLHRAN GSVVSKDDIM DAVWPGLIVE 
ENRLQVHVAA LRKALGASRD LIKTVPGRGY LLVANPPLLH AVAPHPAAAA PGAEATHHAP
LVGRRAELEQ IVDMIDRAPV VTLVGAGGIG KTSLADRVAH TWRGRVGERA LFVELARATT
RDDVLLAIAA ELGLDMHGVP AVDRLGDAFA VSRSLLVLDN AEHVVDLVAD LVESLTARAA
PLRVLVTSRE PLHISVETVF RVSPLAVPDG AATVDEIARH SAVELFLARV RAATPECVID
AAGVRLIGDI CRRLDGLPLA IELAAARVAT LGLEVVASRL DDRLNLLTGG LRSALPRHQT
LRATFDWSYV LLDAAARALF RRMACFVGPF TFDAAREVAM DPGMSPADMI AVLGELIAKS
LVTVEFNGAQ ARYRLTESTR AYALEKLHNE GEFERIAERH ARHEHAQAQA RLPAPVQAVR
EPAAVEPPVA EADALALALR EPARMRDCSI PARRALDAIE AGALGPVDAS SEMRLRAAYA
SALLYTDGDT QTAAAMWERT LGLAGRVGDD AFDASAMVGL WNATLSHGDI HESLRYAMRF
ERAAERRGDR PQRLLANAMV ATSLHYFGEH AQARERLEAA TAELAVAGEP PCAAAALGID
VATLGRTVLA RLVWMQGDVD HAMRLAAQAV ESARRGGSAL ALCVVLGAAA VPIALRHGDH
DIISDYLATL RSAAEANGFD IWLDHAECLA GQFDMQAGHP GAGLARLEPA LRRIEASGFR
RLLAPLVVAY AEGLTRTGRA AEARVKLDAT LACCRAQGEH LFVPELLRAR GLAMLEQART
ADAERAIACE ADGHRHLLMA IHAANGQGAA MWALRGTLDL ADHLIERGRI GQASSLVANL
SGHFDPQSRA VDVRRLARVQ SFIRSETARP TGPAHLRHET LDAMQSAA