Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5826 |
Symbol | |
ID | 4314732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 296467 |
End bp | 299313 |
Gene Length | 2847 bp |
Protein Length | 948 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638153667 |
Product | transcriptional regulator |
Protein accession | YP_777706 |
Protein GI | 115360569 |
COG category | [R] General function prediction only |
COG ID | [COG3903] Predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCAGA TCGGGGCTTT ATCGGTGGAT TTCGAGCAGC GGGACATTCG CCGTCACGGC GCGGCGCTGC GTATTGGCGC GCGCGCGCTC GACATACTTG AAGTACTGCA TCGCGCCAAC GGTTCCGTCG TGTCGAAGGA CGACATCATG GATGCCGTCT GGCCCGGCCT GATCGTCGAG GAGAACCGGC TGCAGGTGCA TGTCGCGGCG TTGCGCAAGG CGCTCGGTGC GAGCCGCGAC CTGATCAAGA CCGTCCCGGG CCGCGGCTAC CTGCTGGTCG CGAATCCGCC GCTCCTGCAC GCGGTGGCGC CGCACCCGGC CGCCGCGGCG CCAGGCGCCG AAGCGACCCA TCACGCCCCG CTCGTCGGCC GCCGCGCCGA GCTCGAGCAG ATCGTCGACA TGATCGACCG TGCGCCGGTC GTCACGCTCG TCGGCGCGGG CGGCATCGGC AAGACGAGTC TGGCCGACCG CGTCGCGCAC ACGTGGCGCG GCCGGGTCGG CGAGCGCGCG CTGTTCGTGG AGCTGGCGCG AGCCACGACG CGCGACGACG TGCTGCTCGC GATTGCCGCG GAACTGGGGC TCGACATGCA TGGCGTGCCG GCCGTCGACC GGCTCGGCGA CGCATTCGCC GTGTCGCGCA GCCTGCTCGT GCTCGACAAC GCGGAGCACG TCGTCGATCT GGTGGCCGAC CTCGTCGAGT CGCTGACGGC GCGCGCCGCG CCGCTGCGGG TGCTCGTGAC GAGCCGCGAA CCGCTTCATA TCTCGGTCGA AACCGTGTTC CGCGTGAGTC CGCTGGCGGT GCCCGACGGC GCCGCAACGG TCGACGAGAT CGCGCGCCAT TCGGCGGTCG AGCTGTTTCT GGCGCGGGTT CGCGCGGCCA CGCCCGAGTG CGTGATCGAC GCGGCCGGTG TCCGGCTGAT CGGCGATATC TGCCGGCGGC TCGACGGGCT TCCCCTCGCG ATCGAACTGG CTGCCGCGCG CGTCGCGACG CTCGGGCTGG AGGTCGTTGC GTCGCGTCTC GACGACCGGC TGAACCTGCT CACCGGCGGC CTGCGCTCCG CGTTGCCGCG CCATCAGACG CTGCGCGCGA CGTTCGACTG GAGCTACGTG CTGCTGGATG CGGCCGCGCG TGCGCTGTTT CGCCGGATGG CGTGCTTCGT CGGCCCGTTC ACGTTCGATG CGGCGCGCGA AGTCGCGATG GATCCCGGCA TGTCGCCCGC CGATATGATC GCCGTGCTCG GCGAGCTGAT CGCCAAGTCG CTGGTGACCG TCGAATTCAA CGGCGCGCAG GCGCGCTACC GATTGACCGA ATCGACGCGC GCGTATGCGC TGGAGAAGCT GCATAACGAG GGCGAGTTCG AACGCATCGC CGAGCGTCAT GCGCGCCATG AACACGCGCA GGCGCAAGCC CGGCTGCCGG CTCCCGTGCA AGCCGTGCGC GAACCCGCGG CGGTCGAGCC GCCGGTCGCG GAAGCCGACG CGCTGGCGCT CGCATTGCGG GAGCCGGCGC GCATGCGCGA CTGTTCGATC CCGGCGAGGC GCGCGCTCGA CGCGATCGAG GCCGGCGCGC TCGGGCCCGT CGACGCGTCG AGCGAGATGC GGCTGCGCGC GGCCTATGCG TCGGCGCTGC TATATACGGA CGGCGATACG CAGACGGCTG CCGCGATGTG GGAGCGCACG CTCGGCCTTG CCGGGCGCGT CGGTGACGAC GCATTCGACG CCAGCGCGAT GGTCGGGCTC TGGAACGCGA CGCTGTCGCA CGGCGACATT CACGAATCGC TGCGCTACGC GATGCGCTTC GAGCGGGCCG CCGAGCGGCG CGGTGACCGG CCGCAACGGC TGCTGGCGAA CGCGATGGTC GCGACGTCGC TGCATTACTT CGGCGAGCAT GCACAGGCGC GCGAGCGGCT GGAGGCGGCC ACGGCCGAGC TGGCCGTGGC CGGCGAACCG CCTTGCGCGG CAGCGGCGCT CGGCATTGAC GTCGCCACGC TTGGGCGGAC GGTGCTGGCG CGGCTCGTCT GGATGCAGGG CGACGTGGAC CATGCGATGC GGCTCGCCGC GCAGGCGGTC GAATCCGCGC GCCGCGGCGG GTCGGCGCTG GCGTTGTGCG TCGTGCTCGG CGCGGCGGCC GTGCCGATCG CGTTGCGCCA TGGCGATCAC GACATCATCT CCGACTATCT CGCGACGCTG CGCTCGGCCG CCGAGGCGAA CGGCTTCGAT ATCTGGCTCG ACCATGCGGA ATGTCTCGCG GGACAGTTCG ACATGCAGGC CGGCCATCCG GGCGCCGGGC TGGCGCGGCT CGAACCCGCG CTGCGACGCA TCGAGGCGAG CGGCTTCCGG CGCCTGCTCG CGCCGCTGGT GGTCGCGTAT GCGGAAGGGC TCACGCGCAC GGGCCGCGCG GCCGAGGCCC GCGTGAAGCT CGACGCGACG CTCGCGTGCT GCCGCGCGCA AGGCGAGCAT CTGTTCGTGC CCGAGCTGCT GCGTGCCCGA GGTCTGGCGA TGCTCGAACA GGCCCGCACC GCCGACGCGG AGCGCGCGAT CGCCTGCGAA GCGGACGGGC ACCGGCATCT GCTGATGGCG ATCCATGCGG CGAACGGGCA GGGCGCGGCG ATGTGGGCGC TGCGCGGCAC GCTTGATCTC GCCGATCATC TGATCGAGCG CGGGCGTATC GGGCAGGCGT CGTCGCTGGT GGCGAACCTG TCCGGGCATT TCGACCCGCA ATCGCGCGCG GTCGACGTGC GGCGCCTCGC GCGGGTGCAG AGCTTCATCC GCTCGGAGAC GGCGCGGCCG ACCGGTCCTG CGCACCTCCG CCACGAGACC CTCGATGCGA TGCAATCGGC CGCGTGA
|
Protein sequence | MIQIGALSVD FEQRDIRRHG AALRIGARAL DILEVLHRAN GSVVSKDDIM DAVWPGLIVE ENRLQVHVAA LRKALGASRD LIKTVPGRGY LLVANPPLLH AVAPHPAAAA PGAEATHHAP LVGRRAELEQ IVDMIDRAPV VTLVGAGGIG KTSLADRVAH TWRGRVGERA LFVELARATT RDDVLLAIAA ELGLDMHGVP AVDRLGDAFA VSRSLLVLDN AEHVVDLVAD LVESLTARAA PLRVLVTSRE PLHISVETVF RVSPLAVPDG AATVDEIARH SAVELFLARV RAATPECVID AAGVRLIGDI CRRLDGLPLA IELAAARVAT LGLEVVASRL DDRLNLLTGG LRSALPRHQT LRATFDWSYV LLDAAARALF RRMACFVGPF TFDAAREVAM DPGMSPADMI AVLGELIAKS LVTVEFNGAQ ARYRLTESTR AYALEKLHNE GEFERIAERH ARHEHAQAQA RLPAPVQAVR EPAAVEPPVA EADALALALR EPARMRDCSI PARRALDAIE AGALGPVDAS SEMRLRAAYA SALLYTDGDT QTAAAMWERT LGLAGRVGDD AFDASAMVGL WNATLSHGDI HESLRYAMRF ERAAERRGDR PQRLLANAMV ATSLHYFGEH AQARERLEAA TAELAVAGEP PCAAAALGID VATLGRTVLA RLVWMQGDVD HAMRLAAQAV ESARRGGSAL ALCVVLGAAA VPIALRHGDH DIISDYLATL RSAAEANGFD IWLDHAECLA GQFDMQAGHP GAGLARLEPA LRRIEASGFR RLLAPLVVAY AEGLTRTGRA AEARVKLDAT LACCRAQGEH LFVPELLRAR GLAMLEQART ADAERAIACE ADGHRHLLMA IHAANGQGAA MWALRGTLDL ADHLIERGRI GQASSLVANL SGHFDPQSRA VDVRRLARVQ SFIRSETARP TGPAHLRHET LDAMQSAA
|
| |