Gene Bamb_5819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5819 
Symbol 
ID4314725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp287118 
End bp287618 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID638153660 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_777699 
Protein GI115360562 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.968797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC TCACCGTGAA TGGCGCGCGG CATACGCTCG ACATCGACCC GTCCACGCCG 
CTGCTCTATG CGCTGCGCAA CGACCTGCAC CTGCACGGTG CGAAGTTCGG TTGCGGCCTC
GGACAATGCG GCGCGTGCAC CGTGATCGTC GACGACAAGC CGATGTTCTC GTGCCTGATC
CCGGTCGCCG CGATCGGCGC ACGCAGCGTC AGGACCATCG AAAGCCTCGG CACCGCCGAG
CGGCCGGGCA AGCTCCAGCA AGCGTTCATC GATCATCAGG CGGCGCAGTG CGGCTATTGC
ATCGCCGGGA TGATCATGCG CGCGCAGGCG CTGCTCGAAC GCAACCCGAA ACCGACCGAA
CGCGAACTGC GCACCCACAT GGAACCGAAC CTGTGCCGTT GCGGCACCCA CCTGCGGATC
CTGGCGGCCG TGCGCCAGGT CGCGGGCCTG CCGGACCCGG AACCGGCCGG CGCGCCGGTC
ATGATCAGCA AAGGCCTCTG A
 
Protein sequence
MITLTVNGAR HTLDIDPSTP LLYALRNDLH LHGAKFGCGL GQCGACTVIV DDKPMFSCLI 
PVAAIGARSV RTIESLGTAE RPGKLQQAFI DHQAAQCGYC IAGMIMRAQA LLERNPKPTE
RELRTHMEPN LCRCGTHLRI LAAVRQVAGL PDPEPAGAPV MISKGL