Gene Bamb_5795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5795 
Symbol 
ID4314702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp269043 
End bp269450 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content62% 
IMG OID638153637 
Productcupin 2 domain-containing protein 
Protein accessionYP_777676 
Protein GI115360539 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.732811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA TCATGCTCAC TCTCGCGCCG CTTACGCTGT CGCTGTTGAT GCCCGTCCAG 
CCGGCCGCCG CCGCCGCACC GCAAGCCAAG GTTACGACGC TGACCACGGA GCCGTTGCCC
GAATATCCGG GCAAGGAGGC CGAGATGATC GTCGTCGATT ATCCGCCCGG CAGCGTCGAT
CCCGTTCATC GTCACGACGC ACACGCATTC GTCTATGTGC TCGACGGCAG CATCGTGATG
GGCCTGAACG GCGGGAAGGA GGTCACGCTT CACGCCGGCG ACACATACCA CGAAGGCCCG
AAGGACATCC ACACGGTCGG ACGCAATGCC AGCAACACGA AGCCGGCAAA ATTCGTCGTG
TTCATGATCA AGAACCAGGG TGCGCCGATC CTCACACCGG TGAAATAG
 
Protein sequence
MKRIMLTLAP LTLSLLMPVQ PAAAAAPQAK VTTLTTEPLP EYPGKEAEMI VVDYPPGSVD 
PVHRHDAHAF VYVLDGSIVM GLNGGKEVTL HAGDTYHEGP KDIHTVGRNA SNTKPAKFVV
FMIKNQGAPI LTPVK