Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5785 |
Symbol | |
ID | 4314692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 259213 |
End bp | 259932 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638153627 |
Product | two component transcriptional regulator |
Protein accession | YP_777666 |
Protein GI | 115360529 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.281368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCACC CCAAACGCAT CCTCATCGTC GAAGACGACG CCGACATCGC CGACGTGCTG AGCCTGCACC TGCGCGACGA GCGCTACGAA GTCGTGCACA GCGCGGACGG CACGGAAGGC CTGCGCCTGC TCGAACAGGG CAACTGGGAC GCGCTGATCC TCGACCTGAT GCTGCCCGGC GTCGACGGCC TGGAAATCTG CCGGCGCGCC CGCGCGATGG CGCGTTACAC GCCGATCATC ATCACCAGCG CGCGCTCGAG CGAGGTGCAC CGGATCCTCG GCCTCGAGCT CGGCGCCGAC GACTATCTGG CGAAACCGTT CTCGGTGCTG GAACTCGTCG CGCGGGTCAA GGCGCTGCTG CGGCGCGTCG ACGCGCTCGC GCGCGATTCG CGGATCGACG CGGGCACGCT CGACGTAGCC GGCCTGTCGA TCGACCCGAT CGCGCGGGAA GCGAGCGTCG ACGGCACGCG CATCGACCTC ACGCCGCGCG AATTCGACCT GCTGTATTTC TTCGCGCGGC ACCCGGGCAA GGTGTTCTCG CGGATGGACC TGCTGAACGC GGTGTGGGGC TACCAGCACG AAGGCTACGA ACACACGGTG AACACCCACA TCAACCGGCT GCGCGCGAAG GTCGAGGCCG ATCCGGCCGA GCCCGTGCGG ATCCTCACCG TGTGGGGACG CGGCTACAAG CTCGCCGCGC CGGACCAGCG GGACGCCTGA
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Protein sequence | MDHPKRILIV EDDADIADVL SLHLRDERYE VVHSADGTEG LRLLEQGNWD ALILDLMLPG VDGLEICRRA RAMARYTPII ITSARSSEVH RILGLELGAD DYLAKPFSVL ELVARVKALL RRVDALARDS RIDAGTLDVA GLSIDPIARE ASVDGTRIDL TPREFDLLYF FARHPGKVFS RMDLLNAVWG YQHEGYEHTV NTHINRLRAK VEADPAEPVR ILTVWGRGYK LAAPDQRDA
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