Gene Bamb_5779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5779 
Symbol 
ID4314686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp250721 
End bp252133 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content66% 
IMG OID638153621 
ProductNAD(P) transhydrogenase, beta subunit 
Protein accessionYP_777660 
Protein GI115360523 
COG category[C] Energy production and conversion 
COG ID[COG1282] NAD/NADP transhydrogenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.496694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.461264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCA ACCTGACTAC CGTCTCCTAT ATCGGCGCCG CGATCCTGTT CATCCTCAGC 
CTCGGCGGGC TGGCCAATCC CGAGACCGCG CGCCGCGGCA ACCTGCTCGG CATGATCGGC
ATGCTGATCG CCGTGCTGGC CACGGTACTC GGCCCGCGCG TGTCGGCCGA GGGCATTCCG
TACATCGTCG CTGCGCTGGT CGTCGGCGGC GCCGTCGGCC TGTACGCCGC GAAGAAGGTG
CAGATGACGC AGATGCCGGA ACTGGTCGCG CTGATGCACA GCCTGGTCGG TCTCGCGGCC
TGCCTGGTGG GTTTCGCGAG CTATATCGAC ACGTCGCTGC AGCTCACCGG CGCGGAGAAG
GCGATCCACG AAGTGGAGAT CTACGTCGGC ATCCTGATCG GCGCGGTCAC CTTCGCGGGC
TCGATCATCG CGTTCGGCAA GCTGTCCGGC AAGATCGGCG GCAAGCCGCT GCTGCTGCCG
GCACGGCACT GGCTGAACCT GGCCGCGCTG CTCATCGTGA TCTACTACGG CCGCGCGTTC
CTGCATGCGG AAACCATCCA GGACGGCATG ATGCCGCTCC TCGTGATGAC GGTGCTGTCG
CTGCTGTTCG GCGTGCACAT GGTGATGGCG ATCGGCGGCG CTGACATGCC GGTCGTGGTG
TCGATGCTCA ACAGCTACTC GGGGTGGGCG GCGGCAGCCA CCGGCTTCAT GCTCGGCAAC
GACCTGCTGA TCGTGATCGG CGCGCTGGTC GGCTCGTCCG GTGCGATCCT GTCGTACATC
ATGTGTCGCG CGATGAACCG CAACTTCATC AGCGTGATCG CGGGCGGCTT CGGCAGCGGC
GCGGGGGTAC CGGCGGCAGC CGGCGGCGCC GCGCAGCCGG CCGGCGAGGC GGTCGCGGTG
AGCGCGATGG AAACGGCCGA GCTGCTGCGC GAAGCGAAGC GCGTGATCAT CGTGCCGGGC
TACGGGATGG CCGTCGCGCA AGCCCAGCAC ACGGTGTTCG AACTGACGAA GCTGCTGCGC
GAAAAGGGTG TCGACGTGCG TTTCGCGATT CACCCGGTCG CGGGCCGCAT GCCGGGCCAC
ATGAACGTGC TGCTGGCCGA AGCGAAGGTG CCGTACGACA TCGTGCTCGA AATGGACGAG
ATCAACGGCG ACTTCCCCGA GGCCGACGTG TCGATGGTGA TCGGCGCGAA CGACATCGTG
AACCCGGCCG CGCAGGACGA CCCGTCGAGC CCGATCGCCG GCATGCCGGT GCTGGAAGTG
TGGAAGGCGA AGACGTCGAT CGTGATGAAG CGCAGCATGG CGTCCGGCTA TGCGGGCGTC
GACAATCCGC TGTTCTACAA GGACAACAAC CGCATGTTGT TCGGGGACGC GAAGTCGATG
CTCACTGAAA TCTTCGGCGC ACTGAAAGCC TGA
 
Protein sequence
MTSNLTTVSY IGAAILFILS LGGLANPETA RRGNLLGMIG MLIAVLATVL GPRVSAEGIP 
YIVAALVVGG AVGLYAAKKV QMTQMPELVA LMHSLVGLAA CLVGFASYID TSLQLTGAEK
AIHEVEIYVG ILIGAVTFAG SIIAFGKLSG KIGGKPLLLP ARHWLNLAAL LIVIYYGRAF
LHAETIQDGM MPLLVMTVLS LLFGVHMVMA IGGADMPVVV SMLNSYSGWA AAATGFMLGN
DLLIVIGALV GSSGAILSYI MCRAMNRNFI SVIAGGFGSG AGVPAAAGGA AQPAGEAVAV
SAMETAELLR EAKRVIIVPG YGMAVAQAQH TVFELTKLLR EKGVDVRFAI HPVAGRMPGH
MNVLLAEAKV PYDIVLEMDE INGDFPEADV SMVIGANDIV NPAAQDDPSS PIAGMPVLEV
WKAKTSIVMK RSMASGYAGV DNPLFYKDNN RMLFGDAKSM LTEIFGALKA