| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5775 |
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| Symbol | |
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| ID | 4314682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 246180 |
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| End bp | 246944 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153617 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_777656 |
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| Protein GI | 115360519 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.95967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCA AACTCGACAA CAAGATCGCA CTCGTCACCG GCGCAACCAG CGGCATCGGC
CTTGCCACGG CCCAACGTTT CGCGGCCGAA GGTGCGCACG TTTATCTCAC GGGCCGGCGC
CCGGCCGAAC TCGATGCCGC CGTGACCGGC ATTCTCGAAG CCGGCGGAAA GGCGACCGGC
GTACGGTCGG ATTCCACCCG GCTCGATGAG CTCGACGCGC TGTACGAGCA AATCAAGAAA
GAGCACGGAC GCCTGGACGT GCTGTTCGTG AACGCCGGCG GCGGTTCGAT GCTGCCGCTG
GGCAGCATTA CCGAGGCGCA CTACGACGAG ACCTTCGACC GCAACGTGAA GGCCGTGCTG
TTCACGGTGC AGAAGGCACT CCCGCTGCTC GCCGATGGCG CGTCGGTGAT TCTGACCGGC
TCGACCGCGG GCAGCGCGGG TACCGCTGCG TTCAGCGTGT ATTCGGCTTC GAAGGCGGCA
GTGCGCGCCT TTGCACGCAG CTGGATTCTC GACCTCAAGG AGCGCCATGT CCGCGTGAAC
ACGATCAGCC CGGGCGCGAC GCGCACGCCC GGCCTGCTCG ATCTCGCCGG TGACGATGCG
GCTCAGCGCC AGGGGCTCGC CGATTACCTG GCTGCCCAGA TCCCGATGGG GCGCCTTGGC
GAGCCGGGCG AGATCGCGAG CGCGGCGCTG TTCCTGGCCT CGGACGACGC GAGCTTCGTG
AACGGCATCG AATTGTTTGT CGATGGCGGC CAGCAACAGA TCTGA
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| Protein sequence | MARKLDNKIA LVTGATSGIG LATAQRFAAE GAHVYLTGRR PAELDAAVTG ILEAGGKATG
VRSDSTRLDE LDALYEQIKK EHGRLDVLFV NAGGGSMLPL GSITEAHYDE TFDRNVKAVL
FTVQKALPLL ADGASVILTG STAGSAGTAA FSVYSASKAA VRAFARSWIL DLKERHVRVN
TISPGATRTP GLLDLAGDDA AQRQGLADYL AAQIPMGRLG EPGEIASAAL FLASDDASFV
NGIELFVDGG QQQI
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