| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5771 |
|---|
| Symbol | |
|---|
| ID | 4314678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 239898 |
|---|
| End bp | 241091 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638153613 |
|---|
| Product | beta-ketothiolase |
|---|
| Protein accession | YP_777652 |
|---|
| Protein GI | 115360515 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATG CAGCGAAGGA AGTCGTGGTG GTGAGCGGTG TCCGTACCGC GATCGGCGAT
TTCGGCGGAA GCCTGAAGGA TTTCTCGCCG ACCGATCTCG GCGCGAAGGT CGTGAGCGAA
GTGCTGTCGC GCGCGAACGT GTCGGGCGAT GCGGTCGGGC ATGTCGTGTT CGGCCACGTC
GTGAACACCG AACCGAAGGA CATGTATCTC GCGCGTGTCG CGGCGATCAA CGGCGGCGTC
GCGCAGCACA CGCCGGCGCT GACCGTGAAC CGTCTGTGCG GCTCGGGCCT GCAGGCGATC
GTGTCGGCCG CGCAGACGAT CATGCTCGGC GATGCCGACA TCGCGATCGG CGGCGGCTCG
GAGAGCATGA GCCGCGCACC GTACACCGTG CCGGCCGCGC GCTTCGGCCA GCGCATGGGC
GACGCGAAGC TCGTCGACAT GATGCTCGGC GCGCTGCACG ACCCGTTCCA GACGATCCAC
ATGGGCGTGA CGGCCGAGAA CGTCGCACGC AAGTACGGCA TTTCGCGTGA CGCGCAGGAT
GCGCTCGCGC TCGAATCGCA TCGTCGCGCG GCGCGCGCGA TCGCCGAAGG CCGCTTCAAG
GATCAGATCC TGCCGATCTC GATCCGCACG AAGAAGGGCG AGGTCGCGTT CGACACCGAC
GAGCACGTGC GTCACGACGC GGGCCCGGAC GATTTCTCGA AGCTGAAGCC GGTGTTCGCG
AAGGAAGACG GCACGGTGAC GGCCGGCAAC GCGTCGGGGA TCAACGATGC GGCCGCCGCG
GTGCTGATGA TGAGCGCGGA TGCCGCGCGT GCGCAGGGCG TGAAGCCGCT CGCGCGTCTG
GTCGCGTATG CACACGCGGG CGTCGATCCG GCGTACATGG GCATCGGCCC CGTGCCGGCC
ACGCAGAAGG CGCTCGAGCG CGCGGGCCTG AAGATCGGCG ATCTCGACGT GATCGAGGCG
AACGAGGCGT TCGCGGCCCA GGCGTGCGCG GTCACGCAGG AGCTCGGTCT CGATCCGGCC
AAGGTCAACC CGAACGGCTC GGGCATTTCG CTCGGCCACC CGATCGGCGC GACGGGCGCG
TTGATCACGG TCAAGGCGCT GTACGAGCTG AAGCGTATCG GCGGGCGTTA TGCGCTCGTG
ACGATGTGTA TCGGCGGCGG CCAGGGCATT GCGGCGATCT TCGAGAACAT CTGA
|
|---|
| Protein sequence | MSNAAKEVVV VSGVRTAIGD FGGSLKDFSP TDLGAKVVSE VLSRANVSGD AVGHVVFGHV
VNTEPKDMYL ARVAAINGGV AQHTPALTVN RLCGSGLQAI VSAAQTIMLG DADIAIGGGS
ESMSRAPYTV PAARFGQRMG DAKLVDMMLG ALHDPFQTIH MGVTAENVAR KYGISRDAQD
ALALESHRRA ARAIAEGRFK DQILPISIRT KKGEVAFDTD EHVRHDAGPD DFSKLKPVFA
KEDGTVTAGN ASGINDAAAA VLMMSADAAR AQGVKPLARL VAYAHAGVDP AYMGIGPVPA
TQKALERAGL KIGDLDVIEA NEAFAAQACA VTQELGLDPA KVNPNGSGIS LGHPIGATGA
LITVKALYEL KRIGGRYALV TMCIGGGQGI AAIFENI
|
|---|
| |