Gene Bamb_5766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5766 
Symbol 
ID4314673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp230867 
End bp231865 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content68% 
IMG OID638153608 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_777647 
Protein GI115360510 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA GACTCGTCAT CGCCGGGATG GGCCACGCAC TGCCGGACCG GATCGTCAGC 
AACGACGAAG TCGCCGGCAT GATCGACACC AGCGACGCGT TCATTCGCGA ACGAACCGGC
GTCGTGGCGC GACGCTATCT CGCTCCCGAT CAGCATCTGG CGGATCTCGC CTGCCCGGCC
GCGGAACGGG CGATGGCCGA TGCCGGCGTG ACGGCGCGCG ACGTCGATCT GCTGATCGTC
AATACGCTGT CGCCGGATCA CCACGATCCG TCGCAAGCGT GCTACATCCA GCCCCGGCTC
GGATTGCGGG AGATTCCGTG CTTCGATATC CGCGCGCAAT GCAGCGGCGG GCTCTACGGG
ATCGAGATCG CGCGTCACTT CCTCGCGAGC GGCCTGTATC GCAACGTGCT GCTGATCTGC
GCCGAAGCCC TGTCGCGGCG GATCGACTCC AGCAATGCCG GCCGCAATCT GTCGATCCTG
CTGAGCGACG GCGCCGCCGC GCTGCTGCTG CAAGCGACGG ACCACCCGGC GCACGGGCTG
ATCGACCTGA CGCTCGGCGC CGACGGCACC CAGTTCGACC TGCTCAGCAC GGAAGCGCCC
GGCGCGCGAC GCCCACGCTT CATCGACGCA GACGACATCG CGGCCGGCCG GCACCATTTC
CGGATGAAAG GCAAGCCGAT GTTCGAAGAC GCCACGCGGC GCATCGTCGA CGCGTGCCGG
CAAATGCTCG ACAAGCACCG GCTGACGATG TCCGATATCG GTCTGGTCGT GCCGCACCAG
CCGAACCTGC GCATCCTCGA CGCGGTCATC GGGCAACTCG GGCTGCCCCG CGAGCGGTGC
ATGATTTCCG TCGATCAGCT GGGCAACATG GCGAGCGCGG CGTTTCCAGT CGCGCTCGCC
ATCGCACGCG AGCTAGGCCG CATGCCGGCC GGGCAGCTCA ACCTCTTCGT GACCTACGGC
GCGGGCGCGA CATGGGCCTG TGCGCTCTAT CGGAGCTGA
 
Protein sequence
MTARLVIAGM GHALPDRIVS NDEVAGMIDT SDAFIRERTG VVARRYLAPD QHLADLACPA 
AERAMADAGV TARDVDLLIV NTLSPDHHDP SQACYIQPRL GLREIPCFDI RAQCSGGLYG
IEIARHFLAS GLYRNVLLIC AEALSRRIDS SNAGRNLSIL LSDGAAALLL QATDHPAHGL
IDLTLGADGT QFDLLSTEAP GARRPRFIDA DDIAAGRHHF RMKGKPMFED ATRRIVDACR
QMLDKHRLTM SDIGLVVPHQ PNLRILDAVI GQLGLPRERC MISVDQLGNM ASAAFPVALA
IARELGRMPA GQLNLFVTYG AGATWACALY RS