| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5762 |
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| Symbol | |
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| ID | 4314669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 224669 |
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| End bp | 225958 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638153604 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_777643 |
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| Protein GI | 115360506 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCAA ATCTGACGTT TGCGCCGGGC GACGTACTTC CCCCCGGAGC ACTCCATACC
GACGGTGCGC CGTCGATCGC CCGGTCGAGC ATCGCGACCG GAACCGACAT CCTGACCGTC
AAGCACCTGT CGAAGATCTT CGGTCCGAAG CCCGAGCGGG CGATCGAGCT GCTCAAGCGC
GGTGTCGGAC GCAACGAGAT CTTCGCGGAA ACCGGCAACA TGGTGGCGGT CAACGACGTA
AGCCTGAGCG TCAGGGCCGG CGAGATCTTC GTGATCATGG GCCTGTCGGG CTCCGGTAAA
TCGACGCTGG TTCGACTGCT CAACCGGCTG ATCGAGCCGA CATCCGGCCA GGTCGTGCTC
GAAGGCCGCG ACATCGCGCC GATGTCGACG CCGGAACTGC GCGACGTGCG GCGCCAGAAG
ATGGCGATGG TGTTCCAGTC GTTCGCACTA CTGCCGAACC GCACCGTGAT CGACAACATC
GCCTACGGGC TCGAGGTCGC GGGCGTCAAG AAGGCGCAGC GCTACGAGGT GGCGCGTGCC
GCGCTGGAGC GCGTCGGCCT CGGGTCGTAC GAGAAGCTGC TGCCGAGCGA GTTGTCCGGC
GGCATGCAGC AGCGCGTGGG GCTGGCTCGC GCGCTGGCGG TGAATCCGTC GGTCCTGCTG
ATGGACGAGG CGTTCTCGGC GCTCGATCCG CTGATCCGCT TCGAAATGCA GAACGAGCTG
TTGCGCCTGC AGAAGGAAGA GCAGCGCACG ATCGTGTTCA TTTCCCACGA TATCGAGGAG
GCGGTGAAGA TCGGCGGCCG CATCGGGATC ATGAAGGACG GCCGCCTGAT CCAGGTCGGC
ACGCCGGCCG AACTGATCCA GACGCCGGCG GATGCATACG TGCAGGACTT CTTCCGCAAC
GTCGACGTGT CGCGCTTCCT GAAGGCGTCC AGCCTGATGA CGACGATCGG GCGCGGGCTG
CTTCGGTGCG ATGCGGCGGC GCCGTCCGAC CGCTACCTGA ACCAGCTGAT CGACAGCGGC
GCGGAATGCG GTTACGTGTG CGACGAGGCC GGCCATTATC TGGGCTGCGT CACGCCCGCC
ACGCTGCACC GCTCCGGTGC GCGACCGATC CGCGAGGCAT TCCTGCACGA CTTCAACGCG
GTTTCGATCG ATACGGATCT TCATCGGCTC GCGTCGATCG CGCTGACCCA GGAGCACGAC
GTGCCGGTGA CGGACGCGGC GGGACAACTG GCGGGCGTCG TGTCCTGCCG GACGATACTC
AAGCAGATGA TGCAACGGAG GGCAGCATGA
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| Protein sequence | MAPNLTFAPG DVLPPGALHT DGAPSIARSS IATGTDILTV KHLSKIFGPK PERAIELLKR
GVGRNEIFAE TGNMVAVNDV SLSVRAGEIF VIMGLSGSGK STLVRLLNRL IEPTSGQVVL
EGRDIAPMST PELRDVRRQK MAMVFQSFAL LPNRTVIDNI AYGLEVAGVK KAQRYEVARA
ALERVGLGSY EKLLPSELSG GMQQRVGLAR ALAVNPSVLL MDEAFSALDP LIRFEMQNEL
LRLQKEEQRT IVFISHDIEE AVKIGGRIGI MKDGRLIQVG TPAELIQTPA DAYVQDFFRN
VDVSRFLKAS SLMTTIGRGL LRCDAAAPSD RYLNQLIDSG AECGYVCDEA GHYLGCVTPA
TLHRSGARPI REAFLHDFNA VSIDTDLHRL ASIALTQEHD VPVTDAAGQL AGVVSCRTIL
KQMMQRRAA
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