Gene Bamb_5759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5759 
Symbol 
ID4314666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp221335 
End bp222630 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content68% 
IMG OID638153601 
Productglycine hydroxymethyltransferase 
Protein accessionYP_777640 
Protein GI115360503 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGAGA ACGCCCGCTT TTTTTCCGAA ACGCTCCAGA GCCGGGATCC GGTGATCGCA 
TCGGAGATCG CACTGGAGCT GCGTCGTCAG CAGAGCCAGA TCGAACTGAT CGCGTCTGAA
AACATCGCGT CGGCGGCGGT GCTGGAAGCC CAGGGGACCG TGCTGACGAA CAAGTACGCG
GAAGGCTATC CGTCCCGGCG GTACTCCGGC GGCTGCGACC ATGTCGACCG GATCGAGTCG
CTCGCGATCG ACCGCGCGTG CGCACTGTTC GACGCCGCGC ATGCGAACGT CCAGCCGCAC
TCGGGCGCGC AGGCCAACGG CGCGGCGATG CTCGCGCTCG TCAAGCCCGG TGACACGGTG
ATGGGCATGT CGCTCGACGC GGGCGGCCAT CTCACGCACG GCGCGCGGCC GGTGCTGTCG
GGGAAGTGGT TCAACGCGGT GCAGTACGGC GTGAGCCCGG ACACGCTGCG CATCGATTAC
GACGACGTGC GCCGGCTCGC CGGGCGGCAT CGTCCGAAAC TGATCATCGC TGGTTACTCG
GCGTATCCGC GTGCGCTCGA CTTCGCCGCG TTCCGCGAGA TCGCGGACAG CGTCGATGCG
AAGCTGATGG TCGACATCGC GCATTTCGCC GGCATCGTCG CGGCCGGCCG GCATCAGAAT
CCGGTGCCGT TCGCCGACGT CGTGACGTCC ACTACGCACA ATACGCTGCG CGGCCCGCGC
GGCGGCTTCA TCCTGACGAA CCATGCCGAG CTCGCGAAGC AGATCGATGC GGCGGTATTT
CCGGGGTTGC AGGGCGGCCC GCTGATGCAT GTCGTCGCCG GCAAGGCCGT GGCGTTCGCC
GAGGCGCTGC GCCCGGAGTT CGCCCGCCAT ATCGACCGGG TGTTGCGCAA CGCGCAGACG
CTCGCCAGCG TGCTGACGGC CGGTGGCCTC TCGCTCGTCA CGGGCGGCAC CGACAACCAT
CTGCTGCTGG TCGACCTGCG TTCGCGGCGC ATGACCGGCG CGCAAGCCGA GAAGGCGCTG
GAGCGCGCCG GCATCACCTG CAACAAGAGC GGGATTCCGT TCGATACGGA AAACCCGATG
GTCACGTCCG GCATCCGGCT CGGCACGCCG GCCGGCACCA CGCGCGGCTT CGGGCCCGCG
CAGTTCGAGC AGATCGGCGA AATGATCGTC GACGTGCTGG CGGCGCTCGA GCGCGATCCG
AGTGGCGACC AGGCGGTCGA ACGGTCGGTG CGGACCCGCG TGCGCGACCT GTGCAGCCAG
TTCCCCATTT ACGCACATGC GGAGGCGTTC GCCTGA
 
Protein sequence
MNENARFFSE TLQSRDPVIA SEIALELRRQ QSQIELIASE NIASAAVLEA QGTVLTNKYA 
EGYPSRRYSG GCDHVDRIES LAIDRACALF DAAHANVQPH SGAQANGAAM LALVKPGDTV
MGMSLDAGGH LTHGARPVLS GKWFNAVQYG VSPDTLRIDY DDVRRLAGRH RPKLIIAGYS
AYPRALDFAA FREIADSVDA KLMVDIAHFA GIVAAGRHQN PVPFADVVTS TTHNTLRGPR
GGFILTNHAE LAKQIDAAVF PGLQGGPLMH VVAGKAVAFA EALRPEFARH IDRVLRNAQT
LASVLTAGGL SLVTGGTDNH LLLVDLRSRR MTGAQAEKAL ERAGITCNKS GIPFDTENPM
VTSGIRLGTP AGTTRGFGPA QFEQIGEMIV DVLAALERDP SGDQAVERSV RTRVRDLCSQ
FPIYAHAEAF A