Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5749 |
Symbol | |
ID | 4314656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 205487 |
End bp | 206164 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638153591 |
Product | TetR family transcriptional regulator |
Protein accession | YP_777630 |
Protein GI | 115360493 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.147109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAAG CAGCAAAAGG CAAGACTGTG CGTGGAACCG GCGTCCGCGA GGCGGCGGCG CAGGAAACCC GCGACAAGAT CCTGCACGCG GCGACCAAGG TCTTCGCGCG CTACGGTTAC GAAGGCGGCA GCGTCGAAAG GATTTCGCGG CTCGCGAAGT CGTACGACCG GATGATCTAT TACTACTACG GGAGCAAGGA GGGGCTGTTC GTTGCGGTGC TCGAAGGCAT CTATCGACGG ATGGACGAGG CGGAGCTCAA AATGGCGCCG GATGCTTCGA ACCCCGTGGA AGCGCTGAAG TCCGTGATTC GCTTCAAGCT GGACTATTAT TGGCGCAATC CCGATTTCAT CACGCTGCTC AACACGGAGA ACCTGCACAA GGGCAAGCAC TTGTCCAAGC TCGAGCGCCG GGGCGAGTAC TCGTCGCATG CGGTAGAGAT CATCGCGAAG ATTCTCGAGA ACGGCGTCGA ACAAGGCCTG TTTCGCACGG GCCTCCGGGC GCGCGACGTT TTCCTGCTGA TCATCTCGAC CGCGTATTTT TATACGTCGA ACCTGTATAC GTTGTCCGCG TTCCTCGGAG AGGAGCTGAA CGCGCCGGAT GCCGTGCGCC ATTGGGAGAC GTTCGTGATC GACAGCGTGC TGCGGGTGGT CCGCAAGGAC GCGTCAGTCG ATGCTTGA
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Protein sequence | MAQAAKGKTV RGTGVREAAA QETRDKILHA ATKVFARYGY EGGSVERISR LAKSYDRMIY YYYGSKEGLF VAVLEGIYRR MDEAELKMAP DASNPVEALK SVIRFKLDYY WRNPDFITLL NTENLHKGKH LSKLERRGEY SSHAVEIIAK ILENGVEQGL FRTGLRARDV FLLIISTAYF YTSNLYTLSA FLGEELNAPD AVRHWETFVI DSVLRVVRKD ASVDA
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