Gene Bamb_5743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5743 
Symbol 
ID4314650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp195822 
End bp200879 
Gene Length5058 bp 
Protein Length1685 aa 
Translation table11 
GC content69% 
IMG OID638153585 
ProductATPase domain-containing protein 
Protein accessionYP_777624 
Protein GI115360487 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC TTTCGACACG CCGCTTTATC GAATTGAGCC CCGGCCCGCC ACGGCTGCAC 
CGCGCGATCG ACGACCATGC GCCGCCGGTT CTGGTCGCCG GGCGCGGCGC GGCGGCGCCG
TCCGCGGTCG CGGCGCTGCA ACGCGAATAT GTATTGCGCT CGGCACTGCA CGAACGCTGG
TCCGCCGTGC CGCAAGCCAT CGTGTCGCAC GGTGGCGGCG CCGTGCTCGT CCTGGCCGAT
CCGGGCGGGA TGCCGCTCTC CGTTGAAGCT GTCCCGCAGC AGCGGTTGTC TGCGTTTCTG
CGGCGCGCGA TTGCGCTCGC GACTGCGCTG GGCGAGATGC ATGCGGCCGG TATCGTGCAT
CGTGCGCTTG CGCCGCATCG CTTCCTCGTG GATGACGACG ATCGTGCGTT CCTGACGGGC
TTCGGCTATG CGCTGGGCCC CCATGCGACC GACCCGTTGC GCGACATCGC TCTCGAGTGG
GACGACACGG ATTTCGTCTA TACGGCGCCC GAGCTCGGCA CGCGCATGAA CCTGCGTGTC
GACGCGCGCG CCGATCTTTA TTCGCTCGGC TGCATTCTCT ACGAGCAGTT GACCGGCGTG
CCGCCGTTCG ATGCGACCGA TGCGGCCGGG CTCGTGCACG CGCACGCCAC GCATTCGGCG
CGCGCCCCTC ACGAACTCTT TGCGCACGTA CCCGAGCAGA TTTCGCGGAT CGTCGTGAAG
TTGCTCGAAA AGGCGCCGGA GCAGCGTTAC CGCACAGCGG CGGGGCTCGT CGCCGACCTG
CAGCGATGCG AGCAGTGCCT GCGCCGCGAC GGTCGCATTC CGATGTTCGC GCTCGATGTG
CATGCGGCGC TGCAGCGTCT GCAGCAAGCC GATCACGTGG TGGGCCGCGA ACAGGAGATC
GACGCGTTGC GCGCGCAGTA CCGTGCCGTC GCCGCCGGTG GCGAGATGCG CGTCGCATGG
GTTTCCGGCT ACTCGGGCAT CGGCAAGTCG ACGCTGCTGC TGGAGGCCGT CGCGCGCATC
AGGCACGACG GCGCGCTGCT CGTGGCCACC AGCAAGGGCG AGGAAGGGCG CCGCGGCACG
CCGTATGCGA TGCTTGCCGA GGCGCTGGCG CCGCTGCTGC AGTTCGTGTT GGGTTGCGCG
GACGACGAAT TCGACAGGTG GCGCGCGCGA ATCGGAACGG CCGTCGCGCC CGTCGGACGC
ACGCTCGCGA GATTCCTGCC GGCGCTCTCG GCGGTGCTGG GCCCGCAAGC GGGGCCGCCC
GAGCAATCCG AACTGGCGCC CGGGCTGGAG CGGGAACGCG TGCTGCAAGC GATCGCCCGG
TTGATCGCGT GTTTCGCGGC GCCGGAGCGC CCGCTCGCGC TGCTGCTCGA CGATCTGCAA
TGGGCCGATG CGGGCACGAT CCAGGTGCTT GAGCGGCTGG TGCAGCAACA CCGCGACACG
GCGTTGCTGC TCGTCGGCGC CTATCGCGGC AACGAGATCG ATGCCGGTCA CCCGTTGCGG
GCCGGCCCGC TGGCCGACGT TGCCGATGCA TTGACGGTGG AGCTCGGGCC GCTGAACGAG
CGCGCGACGA CCGAGCTGAT CGCCCATGCG CTGCATCAGG ACACCGATGC GCTGCGGCCG
TTGTCTGACC TGATCGGGCA GAGAACCGGC CGCAATCCAT TCTTCGTGCA TCATCTGCTG
CGCCTGCTGG CCGACGAAGG CATGCTCGAT TACGACGCGG GCGCGGGCCT GTGGCGCTGG
AACATGGCAC GCATCGCCGC GCATCGCGGC GGCGATGACG TCGCGATGAT GCTGGCGCGG
CAGTTCGAGC TGCTGCCGGA CGGCGCACGA TTCATGTTGC GACTGCTGGC CTGCATCGGC
CAGCGCGCGT CGACGCGCCT GCTGGCCACG GCCGCCGGCC TGAGCGAGCC CGATGCGATC
GACGGGCTGC AGGCAGCGCT CGATGCCGGC AGTGTCCAGC GCGACGGCGA CGACTGGACG
TTCTGGCACG ATCGCATTCG CGAGGCCGCG TATGCGTCGA TTCCGGAGGA CGAGCGCGCA
CCGCTGCATC ACGCGATCGC GTGCCGTTTG CTGGCGGCCG GCGAGGCCTG CGCCGACGCG
TTCGTGCTGG CCGCGCAGGC GAACCTCGCC GGCTCGGTGG TCGCGACACC CGCGCAGCGC
CGCGCGTTCG CGCGCGTGAA CCTGGAGGCC GGACGGCAAG CCCGGGCGTC CACCGCGCAT
CATTCCGCGC TCGGCTTCTT TCGCGCGGCC GTCGATTTCC TCGGCGAACG GGACACCAGC
GACGACGGGC TCGACGCGCG CATGCTGTGC GGCGAGGCCG AGTTCATGAC CGGTGCGCTC
GAAGCGGCCG AAGCACGCCT GGCCGAGCTG GAGCGGGTAG CCGGCGACGG CACGTTCGGC
GCGGATCTCA CGCGCCTGCG CGCGGCGTTG TACACGGCGC TGGGCCGCTT CGATCTGGCG
CTCGGGGTCG GCCTTGCGTT CCTGAAGCGC GCCGGCATCG ATATCCCGCC CCATCCGGAC
AGCGCGGACG TGCATCGCGA ATACCTGCGC CTGCGCGGCT GGCTGGATCG CAACGGGATC
GACGCGCTGC GCGACCTGCC GATCATCGCC GATCCGCTGC AGCGCGCGAT CGTCGACATC
TTTGCCGACC TGATCCCGCC GGCACTCTAT TCCGACCAGG ATCTGGTCGA CATGATTCTG
CTGCGCGCGG TGAATCTGGC GATCGAGCAT GGCCATTCCG ATGCATCGGC CGACGTCTAC
GTCTGCATGA ACCAGATCTT CGGCGTACGT TACGGCGATT ACGCCGCGTC GCTGGCATTC
GGCGAGCTCG CGCTGCATCT GGTCGACGAG CGCGGGCTCG ATCGGTATCG CGGCCGCGTC
TACATGGCGC ACGGCACGAT CGTGGTGCCG TGGGTGTTGC CGGCGCGCTC GGCCCGCGCG
TATATCTCGC GGGCATTCGA GATCACGGTT GAGTGCTGCG ATCATACGTT CGCGCTCTAT
TGCAAGCGCA ACGAGGCGAC CGGCATGCTG TTCGCCGGCG AATTTCTCGG CGACGTGCGC
GATACGGTGA CGCACGGGCT CGCGATCGCG CGCGATGCGA ATTTCCAGCT CGTGATCGAT
GCGCTGCTCG CGCAGCAGAT GCTGCTGAAG CAATTACAGG AAGGCGAGAG CGACGATCGC
GACCGGTTGG CGCCGCCGGA GGGCCGGCCG CCGACCCTGG TCGATCTCGC GTATTGGGTC
TACCGGCTGC AGGCCGCACT GTTGTTCGGC GATCTTCCGG ACGCGCTCGA CGCGCGTCGG
CACGCGGAAG CTTGCGAGCA TGCGGCGCGT TCGTTTTCCG AGCGGGCCGA TCTGCCGTTC
TACGGCGCGC TCGCGCTGCT TGCGCTGCCC TGCCGCGATG CGTCCGACGA GGCTGCGCTG
CAGCGCCATG TCGAGCAGCT CGACGTCTGG GCGCGCGCAT GCCCGGAGAA CTTCGTCGCG
CGACGCGAGC TGGTGCGCGC CGAGCACGCG CGCGTGAACG GGCAGCCGCT GGACGCCGCG
GAAGCCTATG CGCGCGCCGT GGTGCACGCG GGCAGGCATG GCTTTACGCA GGTCGAGGCG
CTGGCCGCCG AGTATGCGGC GCGCTTCCAT GCCGGTCGCG ACACGATTGC CGCGCACGCG
TATTTGCGCC ACGCGCTGAG CGCGTGGCAG CGTTGGGGGG CGCTCGCGAA GGTGCGCGAG
TTGCAGGCCG CGCATCCCGA TGTATTCGAT GCCGGAGCCG CCAATCCGGT CGGGAGCCGG
ATGCACGCAC TGGACGTGAA CGCGGTGCTG CGCGTGTCGA ACGCGCTGGC GAGCGACATC
GTGCCGGCGC GTCTCGTGGA AACGCTGTTG CGCACGACGC TCGAAAGCGC CGGCGCCGAG
CATGGCGCGC TCGCGGTGCT GCGCGAGGGC GTCTGGCACG TACCGGCGCG CGCGGACGTG
ATCGACGGCA CGATCGTCGT GACGCAGGAG GCCGTGTCGT TGACGGCGAA CGTGCTGCCC
GTCTCGGTCC TGCAGGCGGT CGCCCGGACG CAGGAAGGGG TAGTGATCGA CGATGCGTCG
GAGTCGCCGG TTCACGGTCA GGATGCCTAC GTTCGCCGTC GGCGCCCGCG TTCGGTGATG
TGCGTGCCGC TGATGCGTTA TGCAACGCTC GTCGGCGTGC TGTATATGGA AAACAATCTG
GCGGCGCGGA TGTTTACCGC GGCCAAGGCG GCGCTGGTGG AGGTGATCGC GTCGCAGGCC
GCTTTCGCGC TCGAGAACGC GCGGCTCTAC GAGGAGCTGC TCGAGCAGAA CCGTCAGCGC
GCGCATGCCG AGGAGCAATT GCGTGCCGCA CTGGCCGGCC TCGAGCGCGC CAGCCGGCTG
ACCGCGATGG GCGAGCTCGT CGCGTCGATC GTCCACGAGA TCGGCCAGCC GATCGCCGCG
GTCGACACGT CGGCAAGCGC CGGCTTGCGC TGGCTGAACC GGGAACCGCC CGACCTCGGC
GAGGCGCGGG CAATGCTCGA GCACATCAAC CGGAGCGCGG CGCGGGCCAA GAGCATCATC
CAGGCGCTGC GCGCGAAGGC CCGCAAGGCC GCGCCGCAGT TTGCGACGGT CGACCTCGCC
GAGGCCGTGC GCGAGGCCGC GGCGCTCGTC GCGCGGCAGC TCGACACGCT GGACGTGGTG
CTGGAGCTGC GCAGTCACGA GGGCCCCGTC TACGTATACG GCGACCGGAT CCAGCTCCAG
CAGGTCGTGA TCAACCTGCT GACGAACGGC GCCGAATCGA TGGCCGAGCT CGAGACGGCG
CGTCGTCTTT CGCTTGCGTG CGAAGCGCAC GGCGTTGACA GTGTGTGCGT GAGCGTGGAG
GATTCGGGCA GCGGCATTGC GCCCGATATC GCGGACCGGC TGCTCGAACC GCTTTTCACG
ACCAAGGAGA ACGGGATGGG CATGGGCCTC GCCATTTCGC ATTCGATCGT GGACGCGCAC
GGCGGCACGT TGACGCTGTC GCCGCGAGAA GGTGCCGGTA CGCGCGCCAC CGTGATGCTG
CCGCGCGTCG ATCCATGA
 
Protein sequence
MIELSTRRFI ELSPGPPRLH RAIDDHAPPV LVAGRGAAAP SAVAALQREY VLRSALHERW 
SAVPQAIVSH GGGAVLVLAD PGGMPLSVEA VPQQRLSAFL RRAIALATAL GEMHAAGIVH
RALAPHRFLV DDDDRAFLTG FGYALGPHAT DPLRDIALEW DDTDFVYTAP ELGTRMNLRV
DARADLYSLG CILYEQLTGV PPFDATDAAG LVHAHATHSA RAPHELFAHV PEQISRIVVK
LLEKAPEQRY RTAAGLVADL QRCEQCLRRD GRIPMFALDV HAALQRLQQA DHVVGREQEI
DALRAQYRAV AAGGEMRVAW VSGYSGIGKS TLLLEAVARI RHDGALLVAT SKGEEGRRGT
PYAMLAEALA PLLQFVLGCA DDEFDRWRAR IGTAVAPVGR TLARFLPALS AVLGPQAGPP
EQSELAPGLE RERVLQAIAR LIACFAAPER PLALLLDDLQ WADAGTIQVL ERLVQQHRDT
ALLLVGAYRG NEIDAGHPLR AGPLADVADA LTVELGPLNE RATTELIAHA LHQDTDALRP
LSDLIGQRTG RNPFFVHHLL RLLADEGMLD YDAGAGLWRW NMARIAAHRG GDDVAMMLAR
QFELLPDGAR FMLRLLACIG QRASTRLLAT AAGLSEPDAI DGLQAALDAG SVQRDGDDWT
FWHDRIREAA YASIPEDERA PLHHAIACRL LAAGEACADA FVLAAQANLA GSVVATPAQR
RAFARVNLEA GRQARASTAH HSALGFFRAA VDFLGERDTS DDGLDARMLC GEAEFMTGAL
EAAEARLAEL ERVAGDGTFG ADLTRLRAAL YTALGRFDLA LGVGLAFLKR AGIDIPPHPD
SADVHREYLR LRGWLDRNGI DALRDLPIIA DPLQRAIVDI FADLIPPALY SDQDLVDMIL
LRAVNLAIEH GHSDASADVY VCMNQIFGVR YGDYAASLAF GELALHLVDE RGLDRYRGRV
YMAHGTIVVP WVLPARSARA YISRAFEITV ECCDHTFALY CKRNEATGML FAGEFLGDVR
DTVTHGLAIA RDANFQLVID ALLAQQMLLK QLQEGESDDR DRLAPPEGRP PTLVDLAYWV
YRLQAALLFG DLPDALDARR HAEACEHAAR SFSERADLPF YGALALLALP CRDASDEAAL
QRHVEQLDVW ARACPENFVA RRELVRAEHA RVNGQPLDAA EAYARAVVHA GRHGFTQVEA
LAAEYAARFH AGRDTIAAHA YLRHALSAWQ RWGALAKVRE LQAAHPDVFD AGAANPVGSR
MHALDVNAVL RVSNALASDI VPARLVETLL RTTLESAGAE HGALAVLREG VWHVPARADV
IDGTIVVTQE AVSLTANVLP VSVLQAVART QEGVVIDDAS ESPVHGQDAY VRRRRPRSVM
CVPLMRYATL VGVLYMENNL AARMFTAAKA ALVEVIASQA AFALENARLY EELLEQNRQR
AHAEEQLRAA LAGLERASRL TAMGELVASI VHEIGQPIAA VDTSASAGLR WLNREPPDLG
EARAMLEHIN RSAARAKSII QALRAKARKA APQFATVDLA EAVREAAALV ARQLDTLDVV
LELRSHEGPV YVYGDRIQLQ QVVINLLTNG AESMAELETA RRLSLACEAH GVDSVCVSVE
DSGSGIAPDI ADRLLEPLFT TKENGMGMGL AISHSIVDAH GGTLTLSPRE GAGTRATVML
PRVDP