| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5725 |
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| Symbol | |
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| ID | 4314632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 178474 |
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| End bp | 179307 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153567 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_777606 |
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| Protein GI | 115360469 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.519964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCG GCAACCTCAT GCTCATCACC GGCGTCAGCA GCGGCTTCGG CCGCGCGCTC
GCGCAGGAAG CGCTGGCCGC GGGTCATACG GTGGTCGGCA CCGTCAGAAG TGAAGCGGCG
AGGCAGGCGT TCGAAGCGCT GTCCGCGCAT GCGGCGATCG GGCGCGTGCT CGACGTGACC
GACTTCGAGC GCATCGACGG CGTCGTCGCC GACATCGAGG CGAGCGTCGG CCCCATCGAC
GTGCTGGTGA ACAACGCCGG CTACGGGCAC GAAGGCATCC TGGAGGAGTC GCCGCTGTCG
GAGATGCGCC GGCAGTTCGA CGTGAACGTG TTCGGCGCCG TCGCAATGAT GAAGGCCGTC
GTGCCGTTCA TGCGTGAGCG CCGGCGCGGC CGCATTCTGA ACATCACGTC GATGGGCGGC
CACATCACGA TGCCGGGCAT CGCGTATTAC TGCGGCAGCA AGTTCGCGCT GGAAGGGATT
TCGGAAACGC TCGGCCAGGA GCTCGCGCCG TTCGGCATCG CGGTGACCGC CGTCGCGCCG
GGCTCGTTCC GCACCGACTG GGCCGGCCGT TCGATGACGC GCACGCCGCG CTCGATCGCC
GATTACGACG CGATCTTCGA TCCGATCCGC CAGGCGCGCG AGGAAAAAAG CGGCCGGCAA
TTGGGCGATC CCGCCAAGGC CGCGCGCGCG ATGCTCGCGG TCATTGCGGC GGACCGTCCG
CCGGCCCATC TGCTGCTCGG CAGCGATGCG CTGCGGCTCG TGCGCGCCAA ATGGTCAGCG
CTGGAAGACG AGATGCGCGC GTGGGAGGCG GTGACCGTGT CGACGGACGG TTGA
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| Protein sequence | MASGNLMLIT GVSSGFGRAL AQEALAAGHT VVGTVRSEAA RQAFEALSAH AAIGRVLDVT
DFERIDGVVA DIEASVGPID VLVNNAGYGH EGILEESPLS EMRRQFDVNV FGAVAMMKAV
VPFMRERRRG RILNITSMGG HITMPGIAYY CGSKFALEGI SETLGQELAP FGIAVTAVAP
GSFRTDWAGR SMTRTPRSIA DYDAIFDPIR QAREEKSGRQ LGDPAKAARA MLAVIAADRP
PAHLLLGSDA LRLVRAKWSA LEDEMRAWEA VTVSTDG
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