Gene Bamb_5723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5723 
Symbol 
ID4314630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp176937 
End bp177773 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content66% 
IMG OID638153565 
Productalpha/beta hydrolase fold 
Protein accessionYP_777604 
Protein GI115360467 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTACA TCACCACGAA GGACAACGTC GAGATCTTCT ACAAGGACTG GGGCGCGAAG 
GATGCACAGC CGATCGTGTT CCACCATGGC TGGCCGCTGT CGTCCGACGA TTGGGACGCC
CAGATGCTGT TCTTCGTCCA GAAAGGCTAT CGCGTGATCG CGCACGACCG CCGCGGGCAC
GGCCGCTCGG CGCAGGTGTC CGACGGTCAT GACATGGATC ACTACGCGGC GGATGCGTTC
GCGGTGGCCG AGGCGCTCGA CCTGCGCAAC GCGGTGCACA TCGGTCACTC GACCGGCGGC
GGCGAAGTCG CGCGCTACGT GGCCCGGCAC GGCGAGCCGG CCGGCCGCGT CGCGAAGGCG
GTGCTGGTCA GCGCGGTGCC GCCGCTGATG CTGAAGACGG ACGCGAACCC GGAAGGCCTG
CCGCTCGAGG TATTCGACGG CTTCCGCAAG GCGCTCGCCG ACAATCGCGC GCAGTTCTTC
GTCGATGTGC CGAGCGGCCC GTTCTACGGC TTCAACCGGC CCGGCGCGAC GGTGCACCAG
GGCGTGATCC AGAACTGGTG GCGCCAGGGC ATGATCGGCA GCGCGAAGGC GCACTACGAC
GGGATCAAGG CCTTCTCGGA AACGGACCAG ACCGAGGACC TGAAGGCGAT CACCGTGCCG
ACGCTCGTGC TGCACGGCGA GGACGACCAG ATCGTGCCGA TCGCGGATGC CGCGCTGAAG
TCGATCAAGC TGCTGAAGAA TGGCTCGCTG AAAACCTATC CGGGCTACTC GCACGGGATG
CTGACGATCA ACGCGGATGT GCTCAACGCC GACCTGCTGG CTTTCGTGCA GGCGTAA
 
Protein sequence
MPYITTKDNV EIFYKDWGAK DAQPIVFHHG WPLSSDDWDA QMLFFVQKGY RVIAHDRRGH 
GRSAQVSDGH DMDHYAADAF AVAEALDLRN AVHIGHSTGG GEVARYVARH GEPAGRVAKA
VLVSAVPPLM LKTDANPEGL PLEVFDGFRK ALADNRAQFF VDVPSGPFYG FNRPGATVHQ
GVIQNWWRQG MIGSAKAHYD GIKAFSETDQ TEDLKAITVP TLVLHGEDDQ IVPIADAALK
SIKLLKNGSL KTYPGYSHGM LTINADVLNA DLLAFVQA